Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1566 ATGATCATGGCTACATTGAAACACCCTTCAGTGTTTGTCACATTGGTGGCACTTTTAGTGGTGGCTCTTTTCGTGGCTCCAACATCCTCCACGTCCAGAAAAACCCTCAAGCACCACCCTTGTCCAACAAATGGGTTCCGAGTGATGCTTCGCCACGTTGACTCGGGGAAAAACCTCACCAAACTAGAGCGTGTGCAACACGGGATCAAGCGTGGAAAGAGTAGGCTTCAGAGGCTGAACGCAATGGTGTTGGCAGCTTCAACCACGCCGAATTCTGATGAGCTGGAAGCCCCTATCCATGCAGGGAATGGAGAGTACTTGATGGAGTTAGCCATAGGAACTCCACCGGTGTCTTACCCTGCAGTTTTGGACACTGGCAGTGACCTCATATGGACACAGTGTAGGCCTTGCACACGATGTTACAAGCAACCAACACCCATTTTTGACCCCAAGAAGTCCTCTTCGTTTTCCAAGGTCTCATGTGGTAGCAGCTTATGCAGTGCTTTGCCTTCATCTACATGCAGTGATGGGTGTGAGTATGTGTATTCATACGGTGATTATTCAGTTACACAAGGGGTGTTGGGCACTGAGACCTTCACTTTTGGAAAGTCTAAGAAGAAAGTTTCGGTTGACAACATTGGTTTTGGTTGTGGGGAGGATAACGAAGGTGATGGCTTTGAACAAGCCTCGGGGTTGGTCGGGCTTGGACGTGGTCCTTTGTCTTTGGTTTCTCAACTGAATGAACCCAGATTTTCTTATTGTTTGACCTCAATAGATGACACAAAAAAGAGTGTTTTGTTGCTGGGGTCTTCAGAAAAGGTGAAAGATGCAACAGAAGGGGTGACAACCCCTCTTCTCAAAAACCCTTTGCAACCTTCTTTTTACTACCTTTCTCTTGAAGGTATCTCTGTGGGGGACACTAGATTGGCCATTGAGAAGTCCACTTTTGAAGTGGGGAATGATGGGAGTGGAGGTGCGATCATAGACTCTGGCACCACAATTACCTACCTTGAACAAAAGGCCTTTGATGAACTAAAGAAAGAGTTCATTTCTCAAACCAAGCTTCCTGTGGACAAAACTAGCTCAACTGGGTTGGATCTTTGTTTCTCTCTGCCATCAGATGCAACAGAAGTGGAAATTCCGAAGCTGATTTTCCACTTCACTGGTGGGGATTTGGAGCTTCCTGCTGAGAACTACATGATTGGTGACTCCAGCTTGGGAGTGGCTTGCTTGGCCATGGGTGCTGCCAGTGGAATGTCTATATTCGGGAATGTTCAACAGCAGAACATTTTGGTGAACCATGATCTCCAAAAAGATACCATTTCTTTCATCCCTACGTCCTGTGATAAGTTGTGA 1356 0.4668 MIMATLKHPSVFVTLVALLVVALFVAPTSSTSRKTLKHHPCPTNGFRVMLRHVDSGKNLTKLERVQHGIKRGKSRLQRLNAMVLAASTTPNSDELEAPIHAGNGEYLMELAIGTPPVSYPAVLDTGSDLIWTQCRPCTRCYKQPTPIFDPKKSSSFSKVSCGSSLCSALPSSTCSDGCEYVYSYGDYSVTQGVLGTETFTFGKSKKKVSVDNIGFGCGEDNEGDGFEQASGLVGLGRGPLSLVSQLNEPRFSYCLTSIDDTKKSVLLLGSSEKVKDATEGVTTPLLKNPLQPSFYYLSLEGISVGDTRLAIEKSTFEVGNDGSGGAIIDSGTTITYLEQKAFDELKKEFISQTKLPVDKTSSTGLDLCFSLPSDATEVEIPKLIFHFTGGDLELPAENYMIGDSSLGVACLAMGAASGMSIFGNVQQQNILVNHDLQKDTISFIPTSCDKL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1566 451 Pfam Xylanase inhibitor C-terminal 295 443 IPR032799 -
Pvu9g1566 451 Gene3D Acid Proteases 270 451 IPR021109 -
Pvu9g1566 451 SUPERFAMILY Acid proteases 99 449 IPR021109 -
Pvu9g1566 451 Pfam Xylanase inhibitor N-terminal 106 270 IPR032861 -
Pvu9g1566 451 ProSiteProfiles Peptidase family A1 domain profile. 106 444 IPR033121 -
Pvu9g1566 451 PANTHER OS07G0603500 PROTEIN-RELATED 18 450 - -
Pvu9g1566 451 CDD pepsin_A_like_plant 105 448 IPR034161 -
Pvu9g1566 451 PANTHER OS08G0469000 PROTEIN 18 450 - -
Pvu9g1566 451 Gene3D Acid Proteases 84 269 IPR021109 -
Pvu9g1566 451 PRINTS Pepsin (A1) aspartic protease family signature 112 132 IPR001461 GO:0004190|GO:0006508
Pvu9g1566 451 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Pvu9g1566 451 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 326 337 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1566 Pvu-Chr9 22000589 22002558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1566 104 451 Miscellaneous Gene Families AT1G77480 28.346 9.30e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1566 - - gmx:100811294 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1566 9 22000589 22002558 Pvu9g1566 9 22000589 22002558 ECH
Pvu2g2829 2 43926618 43930541 Pvu9g1566 9 22000589 22002558 ECH