Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2829 ATGAAGATGGGGAAAGTGGAGATGGTGCTTGCAATGATGGTGTTGTTCAACATGTCTTCTTGTTCGGCTTGGTTTGGTAACAAACACAAAAGTGGAAGGAGCTCAATTCTCCCAAGTCAACCCACGTCATCATCATGTCCAAGGCTATTGAATCCTGCTGGCTCTTCTGTTGTGATCCCTCTTCATGGCAACGTTTATCCTGTTGGGTTCTATAATGTTACTCTCAATATCGGTCAGCCACCAAGGCCTTATTTTCTTGATGTGGACACAGGTAGTGACCTCACATGGCTCCAGTGTGATGCCCCTTGTACCCATTGCTCTGAGACACCCCATCCACTGTACAGGCCTAGCAATGACTTTGTTCCTTGCAAGGATCCCCTTTGTGCATCCTTGCAGCCCTCTGATGACTACAACTGTGAGCACCCTGATCAATGTGACTATGAAATTAATTATGCAGATCAGTACTCAACCTTCGGTGTGCTTCTAAATGATGTCTACCTTCTTAACTTTACCAATAGAGTCCAACTTAAAGTTCGGATGGCACTCGGATGTGGATATGATCAAGTCTTCTCTCCTTCTTCTTACCATCCCTTAGATGGAATACTTGGCCTTGGAAGGGGAAAGACCAGCTTGGTATCCCAGCTGAATAATCAGGGCTTGGTGCGAAATGTGATTGGGCACTGTTTAAGTTCACAAGGAGGAGGGTATATCTTCTTTGGAAATGCATATGATTCTGCTCGAGTGACATGGACTCCAATGTCATCTGTAGATCCCAAACATTACTCTGCAGGGCCAGCTGAACTTGTTTTTGGAGGGAGGAAAACTGGGGTTGGAAGTCTAACTGCTGTTTTTGATACTGGGAGTTCTTATAGTTACTTCAACTCTCGTGCTTACCAAGCATTACTTTCTTGGCTGAAGAAAGATTTAACTGGAAAGCCCCTGAAAGCAGCACCTGATGATCAGACTTTACCTCTCTGCTGGCACGGTAGAAGACCTTTCAAAAGCATACGTGAAGTTCGAAGATACTTCAAGCCTGTGGCACTCACTTTCAACAATGGTGGAAGAGTTAAAGCTCAATTTGAGATCGCTCCTGAAGCTTATCTTATTATATCAAACCTGGGAAATGTTTGTCTGGGCATTCTAAACGGCTCTGAAATAGGTTTGGAGGAACTGAACCTAATTGGAGACATATCCATGCAAGACAAGGTGATGGTATTCGAAAATGAGAAGAACCTAATTGGTTGGGGACCGGCAGAATGCAGCCGTGTTCCAAAATCTAGAGATGTCAGTATTTGA 1296 0.4429 MKMGKVEMVLAMMVLFNMSSCSAWFGNKHKSGRSSILPSQPTSSSCPRLLNPAGSSVVIPLHGNVYPVGFYNVTLNIGQPPRPYFLDVDTGSDLTWLQCDAPCTHCSETPHPLYRPSNDFVPCKDPLCASLQPSDDYNCEHPDQCDYEINYADQYSTFGVLLNDVYLLNFTNRVQLKVRMALGCGYDQVFSPSSYHPLDGILGLGRGKTSLVSQLNNQGLVRNVIGHCLSSQGGGYIFFGNAYDSARVTWTPMSSVDPKHYSAGPAELVFGGRKTGVGSLTAVFDTGSSYSYFNSRAYQALLSWLKKDLTGKPLKAAPDDQTLPLCWHGRRPFKSIREVRRYFKPVALTFNNGGRVKAQFEIAPEAYLIISNLGNVCLGILNGSEIGLEELNLIGDISMQDKVMVFENEKNLIGWGPAECSRVPKSRDVSI* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2829 431 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 86 97 IPR001969 GO:0004190|GO:0006508
Pvu2g2829 431 Gene3D Acid Proteases 50 239 IPR021109 -
Pvu2g2829 431 SUPERFAMILY Acid proteases 63 423 IPR021109 -
Pvu2g2829 431 Pfam Xylanase inhibitor C-terminal 278 415 IPR032799 -
Pvu2g2829 431 ProSiteProfiles Peptidase family A1 domain profile. 71 416 IPR033121 -
Pvu2g2829 431 Pfam Xylanase inhibitor N-terminal 71 241 IPR032861 -
Pvu2g2829 431 PANTHER ASPARTYL PROTEASES 2 425 IPR001461 GO:0004190|GO:0006508
Pvu2g2829 431 PRINTS Pepsin (A1) aspartic protease family signature 77 97 IPR001461 GO:0004190|GO:0006508
Pvu2g2829 431 PRINTS Pepsin (A1) aspartic protease family signature 282 293 IPR001461 GO:0004190|GO:0006508
Pvu2g2829 431 PRINTS Pepsin (A1) aspartic protease family signature 392 407 IPR001461 GO:0004190|GO:0006508
Pvu2g2829 431 Gene3D Acid Proteases 240 424 IPR021109 -
Pvu2g2829 431 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2829 Pvu-Chr2 43926618 43930541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2829 55 426 Miscellaneous Gene Families AT1G44130 51.064 2.29e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2829 - - gmx:100783051 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2829 2 43926618 43930541 Pvu2g2829 2 43926618 43930541 ECH
Pvu2g2829 2 43926618 43930541 Pvu9g1566 9 22000589 22002558 ECH