Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1389 ATGGATATTGCACATTTTTTGTTTGGAATATTTGGGAATGTTTCCGCTCTGTTCCTCTTCTTGGCTCCTGTGATCACATTCAAGAGGATTATAAAGAACAGATCAACAGAGAAGTTCTCGGGAATTCCATATGTCATGACACTGCTCAATTGTCTGCTTTCAGCTTGGTATGGTCTACCTTTTGTGTCTCCCCACAATATATTAGTGTCAACAGTGAATGGCACTGGATCTTTGATTGAGATCGTGTACGTGTTGATCTTCATCGTATTGGCTCCCAAGAAGGAGAAGGTTAAAATTCTTGGTCTCTTCACCTTCGTGCTCTCTGTGTTCTCTGCTGTTGTTTTTGTGTCCCTTTTTGCGCTTCATGGCAATTCCAGAAAGCTCTTCTGCGGCTTTGCTGCTGCAATATTTTCCATAATCATGTATGGCTCTCCACTCTCAATTATGAGATTAGTGATCAAAACCAAGAGCGTGGAGTTCATGCCCTTCTTCTTGTCTCTGTTTGTGTTTCTCTGCGGCACTTCCTGGTTTATCTTTGGTCTGCTAGGCCGTGACCCATTTGTTGCTGTACCTAATGGTGTTGGTTCCGCTTTGGGGACAATGCAACTAATATTGTATTTCATATACCGAGACAATAAAGGTGCTGCAAGGAAACAAACCCCAGCAGAGGAGGAATTCATGGAGATGGGGGTTGCAAAGCCCCAACAAGGGAAGCAATCCAATGCAAATGGAACTCAAGGATGA 744 0.4328 MDIAHFLFGIFGNVSALFLFLAPVITFKRIIKNRSTEKFSGIPYVMTLLNCLLSAWYGLPFVSPHNILVSTVNGTGSLIEIVYVLIFIVLAPKKEKVKILGLFTFVLSVFSAVVFVSLFALHGNSRKLFCGFAAAIFSIIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDPFVAVPNGVGSALGTMQLILYFIYRDNKGAARKQTPAEEEFMEMGVAKPQQGKQSNANGTQG* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1389 247 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 244 IPR018180 GO:0051119
Pvu9g1389 247 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Pvu9g1389 247 Pfam Sugar efflux transporter for intercellular exchange 131 213 IPR004316 GO:0016021
Pvu9g1389 247 PANTHER RAG1-ACTIVATING PROTEIN 1 4 244 - -
Pvu9g1389 247 Gene3D - 125 220 - -
Pvu9g1389 247 MobiDBLite consensus disorder prediction 227 247 - -
Pvu9g1389 247 Gene3D - 9 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1389 Pvu-Chr9 19791712 19794523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1389 1 190 Miscellaneous Gene Families AT1G21460 78.947 2.92e-108 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1389 K15382 - gmx:100800304 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1389 9 19791712 19794523 Pvu9g1389 9 19791712 19794523 ECH
Pvu1g0662 1 8039774 8042757 Pvu9g1389 9 19791712 19794523 PCT