Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0662 ATGGATATTGCTCATTTCGTGTTCGGCATATTTGGGAATGCTTCTGGTTTGTTCCTCTTCTTGGCCCCAATAGTAACATTCAAGAGGGTCATTACGAACAAATCCACAGAGAAGTTCTCTGGCGTTCCATACCCTATGACACTGCTCAACTGTCTGCTTTCTGCTTGGTATGGTTTACCATTTGTGTCCCCAGACAACATACTAGTATCAATAATCAATGGCATAGGAGCAGCGATTGAAGTGACATACGTTTTCATCTTCGTGTTGTTTGCACCCAAGAAAGAGAAGGCGAAGATTCTTGGCCTTTTCTCCTTCGTGGTGGCAGTGTTCTCTGCTGTGGTTTTGGTGTCCCTGTTAGCTCTCCATGGAAATGCCAGAAAACTCTTCTGTGGCTTCGCTGCTTCAATCTTTTCCATCATCATGTATGGGTCTCCCCTCTCCATTATGAGGCTAGTGATCAGAACCAAGAGTGTGGAGTTTATGCCCTTCTTCCTGTCGCTGTTTGTTTTCCTCTGTGGCACGTCTTGGTTTATCTACGGTCTTCTAGGTCGTGACCCTTTTGTGGCTGTACCTAATGGCGTGGGTTCAGCGTTGGGGACGATCCAACTGATACTGTATTTTATATACCGTGACAGTAAAAGTGATGGAAAGAAGGCAACAGCAGCATCATCGTCTGGAACACAAGAAGAAGGAACCGTGGAGATGGCAAAGCATGCCAACTCCAATGGAACAACTACGCAGGAAGAACAGGTCTAG 756 0.459 MDIAHFVFGIFGNASGLFLFLAPIVTFKRVITNKSTEKFSGVPYPMTLLNCLLSAWYGLPFVSPDNILVSIINGIGAAIEVTYVFIFVLFAPKKEKAKILGLFSFVVAVFSAVVLVSLLALHGNARKLFCGFAASIFSIIMYGSPLSIMRLVIRTKSVEFMPFFLSLFVFLCGTSWFIYGLLGRDPFVAVPNGVGSALGTIQLILYFIYRDSKSDGKKATAASSSGTQEEGTVEMAKHANSNGTTTQEEQV* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0662 251 MobiDBLite consensus disorder prediction 216 251 - -
Pvu1g0662 251 Gene3D - 9 104 - -
Pvu1g0662 251 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 239 IPR018180 GO:0051119
Pvu1g0662 251 Gene3D - 126 220 - -
Pvu1g0662 251 PANTHER RAG1-ACTIVATING PROTEIN 1 4 239 - -
Pvu1g0662 251 MobiDBLite consensus disorder prediction 218 251 - -
Pvu1g0662 251 Pfam Sugar efflux transporter for intercellular exchange 131 213 IPR004316 GO:0016021
Pvu1g0662 251 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0662 Pvu-Chr1 8039774 8042757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0662 1 190 Miscellaneous Gene Families AT1G21460 77.895 6.51e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0662 K15382 - gmx:100799083 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0662 1 8039774 8042757 Pvu1g0662 1 8039774 8042757 ECH
Pvu1g0662 1 8039774 8042757 Pvu9g1389 9 19791712 19794523 PCT