Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1376 ATGGCTAAAGTTTGTTGGCCATATTTTGATCCCGAGTATGAGAACTTCAGCAATAGAATGAACCCTCCAAGGGTCTCTGTGGACAATGCCAGTTGTCATGACTGTACACTGATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTCGTGCAAATCTTGACCGACCTTGACTTCATAATTACCAAAGCTTATATATCTTCTGACGGCGGTTGGTTTATGGATGTGTTTCATGTTACGGATCAGCAAGGAAGAAAGATAACAGATAGCAAAACCATCGACTTCATTGAAAAGGCTCTAGGACCAAAGAGCCAGAGCAAAGAAGGGGTGAAAATTTTGCCAAGCAAAAGGGTTGGAGTGCATTCTGTTGGTGATCATACAGCCATTGAACTAATTGGCAGAGACCGCCCTGGTCTCTTGTCTGAGATTTCAGCTGTTCTTGCCAACCTCCGTTTTAATGTTTTTGCAGCAGAAGTGTGGACTCATAACAGGCGAATTGCTTGCGTTCTTTATGTCAATGATGCTACAAACCGAGCTGTGGATGAGCCAAACAGATTATCTCTAATGGAGGAGCAGCTCAACAACATCTTACGAGGATGTGATGGTGAGAAAGTTGCTAGGACTAATTTCTCCATGGGTTTCACCCACATGGATCGGCGGCTTCACCAAATGTTGTTTGCTGATCGGGATTATGAAAGTTATAGAGCAGCAAGAGACGTTAATTGTCCTCTCTCTTTCAGGCCTAAAATCACTATAGAACGTTGTGAGGAGAAAGGGTACTCGGTGGTCACAGTCAAGTGCAAGGATCGGGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAGTCTCATCAGATGGCCCTTATGCATCCCAGGAGTATTTTATTCGACATGTGGATGGATGCACACTTGACACTGAAGGAGAGAAAGAAAGGGTCATCCAATGCATTGAAGCTGCTATTCGAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTGTGTGCAAAGGATAGAGTTGGTTTGCTGTCGGAAGTAACAAGGATTCTACGAGAGAATGGGTTGACAGTGTGTAGGGCAGGTGTATCAACCAGAGGGGAGCAAGCATTGAATGTGTTCTACGTGAGGGATGCATCAGGGAACCCAGTGGACATGAAAACTATGGAAGCACTTGGTAAAGAAATAGGTAAGACAATGATGGTTTATGTGAAGAGAGTGCCAACCAATGCTAAAGTGCCAGAGACTCGAGGGTGGGCTAAAACTAGTTTCTTCTTTGGTAACTTGTTAGAAAGGTTCTTGACCTGA 1338 0.4402 MAKVCWPYFDPEYENFSNRMNPPRVSVDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGRKITDSKTIDFIEKALGPKSQSKEGVKILPSKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVFAAEVWTHNRRIACVLYVNDATNRAVDEPNRLSLMEEQLNNILRGCDGEKVARTNFSMGFTHMDRRLHQMLFADRDYESYRAARDVNCPLSFRPKITIERCEEKGYSVVTVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYASQEYFIRHVDGCTLDTEGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTRGEQALNVFYVRDASGNPVDMKTMEALGKEIGKTMMVYVKRVPTNAKVPETRGWAKTSFFFGNLLERFLT* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1376 445 CDD ACT_ACR_3 262 336 - -
Pvu9g1376 445 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 445 - -
Pvu9g1376 445 SUPERFAMILY ACT-like 125 201 IPR045865 -
Pvu9g1376 445 ProSiteProfiles ACT domain profile. 342 419 IPR002912 -
Pvu9g1376 445 ProSiteProfiles ACT domain profile. 130 209 IPR002912 -
Pvu9g1376 445 SUPERFAMILY ACT-like 32 106 IPR045865 -
Pvu9g1376 445 Gene3D - 337 419 - -
Pvu9g1376 445 Gene3D - 128 202 - -
Pvu9g1376 445 SUPERFAMILY ACT-like 338 407 IPR045865 -
Pvu9g1376 445 ProSiteProfiles ACT domain profile. 37 117 IPR002912 -
Pvu9g1376 445 Pfam ACT domain 130 199 IPR002912 -
Pvu9g1376 445 Pfam ACT domain 37 86 IPR002912 -
Pvu9g1376 445 CDD ACT_ACR_4 340 411 - -
Pvu9g1376 445 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 445 IPR040217 -
Pvu9g1376 445 CDD ACT_ACR_1 35 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1376 Pvu-Chr9 19575822 19582666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1376 - - gmx:100789173 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1376 9 19575822 19582666 Pvu9g1376 9 19575822 19582666 ECH
Pvu1g0674 1 8292901 8301322 Pvu9g1376 9 19575822 19582666 PCT