Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0674 ATGGCAAAAGTTTGTTGGCCATATTTTGATCCCGAGTATGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTGTGGACAATGATAGTTGCCATGATTGTACACTGATCAAGTTTGATAGTATTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCTTGACAGACCTTGACTTCATAATTACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACCGATCAGCAAGGAAAGAAGATAACAGACAGCAAAACAATAGACTTCATTGAAAAGGCTTTAGGACCAAAGGGCCAGAGCACAGAAGGAGTAAGGAGTTGGCAAGGCAAAAGGGTTGGAGTTCATTCAATTGGTGATCATACAGCCATTGAGCTCATTGGAAGGGACCGGCCTGGTCTCTTGTCTGAGATATCAGCAGTCCTTGCCAGCCTCCAATTCAATGTGATTGCTGCTGAAGTTTGGACTCATAACAGGAGAATAGCTTGTGTGCTTTATGTGAATGATGCTACAAACGAAGCCATGGATGAATCAAAAAGATTGTCTATTATGGAGGAGCAGCTGAACCACATCCTACGCGGGTGTGAGGATGACGAGAAAGTGGCTAGGACCAGTTTTTCAATGGGTTTCACCCACATGGATCGGAGGCTCCACCAAATGCTATTTGCTGACAGGGACTATGAAAGTGCTGGAGTAACAACAACTGATTGTGCTCCTTCTTTTAGGCCAAAAATCAGAATAGAACGTATTGTGGAAAAAGGGTACTCAGTGGTTAGTGTGAGATGCAAAGATCGGGCAAAATTGATGTTTGACATTGTTTGCACTCTCACCGACATGCAGTATGTGGTTTTCCATGCTACAATCTCATCGGAAGGCCAATATGCATCCCAGGTACATATCATTTATCAATAA 933 0.4277 MAKVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKGQSTEGVRSWQGKRVGVHSIGDHTAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNEAMDESKRLSIMEEQLNHILRGCEDDEKVARTSFSMGFTHMDRRLHQMLFADRDYESAGVTTTDCAPSFRPKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSEGQYASQVHIIYQ* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0674 310 SUPERFAMILY ACT-like 125 200 IPR045865 -
Pvu1g0674 310 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 308 IPR040217 -
Pvu1g0674 310 Coils Coil 174 194 - -
Pvu1g0674 310 SUPERFAMILY ACT-like 32 106 IPR045865 -
Pvu1g0674 310 CDD ACT_ACR_1 35 106 - -
Pvu1g0674 310 Gene3D - 124 201 - -
Pvu1g0674 310 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 308 - -
Pvu1g0674 310 Coils Coil 309 310 - -
Pvu1g0674 310 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
Pvu1g0674 310 Pfam ACT domain 37 85 IPR002912 -
Pvu1g0674 310 Pfam ACT domain 130 167 IPR002912 -
Pvu1g0674 310 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0674 Pvu-Chr1 8292901 8301322 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0674 - - gmx:100789044 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0674 1 8292901 8301322 Pvu1g0674 1 8292901 8301322 ECH
Pvu1g0674 1 8292901 8301322 Pvu9g1376 9 19575822 19582666 PCT