Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1368 ATGGCTAACAACGCTGCTGCCTGTGCTGACAGAGCAACTAGTGACATGCTCATTGGCCCGGACTGGGCTGTCAACATAGAGTTGTGTGATATCATTAATATGGACCCGGGGCAAGCAAAGGATGCATTGAAGATACTCAAAAAACGTTTGGGCAGTAAAAATCCAAAAATACAGCTTCTGGCACTTTTTGTATTGGAGACCCTCAGTAAAAATTGTGGTGAAAGTGTATTTCAGCAGATAATCGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGCCAGATTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACATGGCAAGAAGCTTTTGGGGGGTCTACTGGGGTTTATCCTCAATATCATGCAGCGTATAATGAATTGAAGTCTGCTGGAGTTGAGTTTCCACCACGAGATGAGAATAGTGTACCATTCTTCACTCCTCCTCAAACTCAGCCAATTGTTCATTCTGCTGAAGAATATGATGATGCTACTATTCAGGCTTCTCTCCAGTCAGATGCATCTGGCCTTAGTTTGATAGAGATTCAAAATGCTGAAGGACTAGCTGATGTGTTGATGGAAATGCTTAGTGCCTTGAATCCTAAAGACCATGAGGGTGTGAAGGAGGAAGTGATTGTTGACCTTGTTGACCAGTGCCGTTCATACCAAAAGCGGGTCATGCTTCTTGTGAACACTACTACGGATGAGGAGCTTTTAGGTAAGGGATTGGCACTGAATGACAGTCTTCAGCGAGTGCTCTGTAGACATGATGATATGGTGAAAGGAACTTCTGATTCAGGTGCTAGAGAAGCAGAAACTACAGTTCTGCCACTTGTAAATGTAAACCATGAAGATGATGAATCAGAAGAGGATTTTGCTCAACTAGCCCATAGGTCATCACGTGATTCTCATGCACAGAATAGGAAACCAGTCTATGACAAGGCAGAACCAGGGAGGATAAACCCAGTTATTCCCCCACCGCCAGCATCAAAGAAGCCTGTCTACTCTGGCACTGGTGTGGTTGACTATCTCAGCGGTGATACATACAAGACAGAAGGATCTCCTCAAAACTCAGAACGCACTTCATTTGCAGCTCCTGTCCATTCTAGCCCTAATCCAACCTCATCAGTGTCTTCATCTCGTCCCCATGCCGTGAGTACCTCAGCACCTATTTTTAGCAGCCAGCCTGTGTATGATGAACAGCCATCTTCTGAGAGGCTGCCTCAAGCTCCCTTGGATACCCAATCTTCTGGCATCATTCCACCCCCACCTTCAAAGTATAATCAGAGACAACAGTTTTTTGAGCAACAAGGTGCATCCCATTCAAGTAGTGGATCCAATTCCTCTTATGACAGCTTGGTGGGACAAACTCAAAATCTCTCGCTGAATTCATCCACCCCAACCAAAGAACAGAAGCCAGAAGATGCCCTTTTCAAAGATCTTGTTGATTTTGCGAAATCCAAAACCTCATCATCTTCCAAACCCAATAATAGGTCATATTGA 1518 0.4387 MANNAAACADRATSDMLIGPDWAVNIELCDIINMDPGQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIIERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGSTGVYPQYHAAYNELKSAGVEFPPRDENSVPFFTPPQTQPIVHSAEEYDDATIQASLQSDASGLSLIEIQNAEGLADVLMEMLSALNPKDHEGVKEEVIVDLVDQCRSYQKRVMLLVNTTTDEELLGKGLALNDSLQRVLCRHDDMVKGTSDSGAREAETTVLPLVNVNHEDDESEEDFAQLAHRSSRDSHAQNRKPVYDKAEPGRINPVIPPPPASKKPVYSGTGVVDYLSGDTYKTEGSPQNSERTSFAAPVHSSPNPTSSVSSSRPHAVSTSAPIFSSQPVYDEQPSSERLPQAPLDTQSSGIIPPPPSKYNQRQQFFEQQGASHSSSGSNSSYDSLVGQTQNLSLNSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNNRSY* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1368 505 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Pvu9g1368 505 CDD VHS 10 135 - -
Pvu9g1368 505 SUPERFAMILY ENTH/VHS domain 4 142 IPR008942 -
Pvu9g1368 505 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Pvu9g1368 505 MobiDBLite consensus disorder prediction 354 476 - -
Pvu9g1368 505 Gene3D - 176 274 IPR038425 -
Pvu9g1368 505 Pfam VHS domain 9 136 IPR002014 GO:0035091|GO:0043130
Pvu9g1368 505 Pfam GAT domain 194 267 IPR004152 GO:0035091|GO:0043130
Pvu9g1368 505 Gene3D - 2 158 IPR008942 -
Pvu9g1368 505 MobiDBLite consensus disorder prediction 287 482 - -
Pvu9g1368 505 MobiDBLite consensus disorder prediction 295 320 - -
Pvu9g1368 505 PANTHER TOM1-LIKE PROTEIN 4 1 504 - -
Pvu9g1368 505 CDD GAT_GGA_like_plant 186 264 - -
Pvu9g1368 505 SUPERFAMILY GAT-like domain 140 267 - -
Pvu9g1368 505 PIRSF TOM1 1 505 IPR014645 -
Pvu9g1368 505 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Pvu9g1368 505 PANTHER TOM1-LIKE PROTEIN 1 504 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1368 Pvu-Chr9 19489960 19496535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1368 - - gmx:100792343 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0677 1 8328312 8333914 Pvu9g1368 9 19489960 19496535 PCT