Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1340 ATGTTGGCTCACACCCTCTGCACGTGCCACATGGTGTTCTCCGTCGACCGGATTACTCCCACCATGGTGTCTGTGTTCTCTGGCATTGATAATGCCAGAGTGTTGGCTTTCCGCTTCCAATTTCGAAGGAACACACACCTCCTCACTGCTCAACTTTCCAATTCTTTCTCCAATTTCGGATTTGATTCTCTCTCTCAGGTTTTGAATTCCGATCAATCGCATGTTCCATCACGGTTGCCTTGGATGGGTCCATTTCCGGGTGACATTGCTGAAGTGGAGGCATATTGTAGGATCTTTAGGAATTCTGAAAGGCTTCATTCTGCTTTAAGGGATGCCTTGTGGAACCCGATCACTGGCGAATTTAGTGTTTCGTATGAGGTTCCGTCTGACGAGAAACAGTTTCTGGAGGATAAAATAGTATCTGTCATTGGATGCATTGTGGCCCTTGTGGATAGTGGGAGGCAGGATCTTCTTTCTGGAAGATCTTCGATTGTGACTCCCTTTCGTGCCACAGAGGTTGCTGTGATGGAGGATACACTTCCCCCACTTGCCCTTTTCAGGAGCGAGATGAAGAGGTGTTGTGAGAACTTGCACGTTGCTCTTGAGAACTATATAATTCCTGGCGATGATCGGAACTTGGATGTATGGAGGAAACTTCAGAGACTGAAGAATGTGTGCTATGATTCTGGCTTTCCTCGTGGGGAGGATGATCCATGTTCTTTACTGTTTGCAAATTGGAGTCCTGTGTATTTATACTCTTCCATAGAGGATATGGAATCCAAAGAATCTGAACCAGCTTTTTGGACAGGTGGGCAGGTAACGGAAGAAGGCATAAATTGGTTACTTGATAAAGGATATAAGACCATCATAGATCTCAGAGAAGAAGATGTAAAAGATAGCTTCTATCAAGCAACTGTGTATGATGCTATTTCATCTGGAAGAATTGAGTTGGTCAGGATCCCTGTTAAAGATAGGGCTGCACCTACAAGGGAACAGGTTGTGAGGTTTGCATCTTATGTTTCAGATTGCAGTAAAAGACCAATTTATCTTCATAGCAAGGAAGGAATTTGGAGAGCATCTGCCATGGTCTCTAGATGGAGGCAGTACGTGACTCGCTCTACATCACAGTTTGTTTCTAATCAAGCAGTTATTTCCAATACCATGTTATTGGATTATACAAATGGATCTGGAAAAATGCAGGACTCAATGATTGCCGAGTTGTCATTCCAGGAAAAGGATACCAATTTGCCGCAAGAGGGTGGAACGCATGGTTCTACTGGCTCATTTGACTTATGTAACTCTTTAAAGAAGAATAATGGGAAAACACAAAGCAATGGGGGCATAAGTCAACTTACTCCTGATAGTAGGGCCTCATCACAAGCCACTGGTGCTACTGGAGAAGGATCTTTTCCAAGTTTCTCCAGCAAAACCAGCCCTTTAGAAGCTCAAGTTCCTCCTTTTGATATATTTTCTAAAAAAGAGATGTCCAAATTTTTTGGAAGTAGGAAGATCTCAAAACCATCTTATTTCAGTTATCAGGTTAAAAGATTGGAATGCCTGCCAGATGCGAGGAGCTCTGAACCTAAAATTGTGGGTCCAGCAAAAAGTTCCAATGGGTCAGCTCGGTCACATAACATAGTTGGTAGCAATTGGAAGTTAGTGAATGTGAATAATTCCAGTTCTGTTTGGACAACAGTTAATGGGTATAGTGAAGGGGAAATGAATTACAGGGCTGATGCAAATATCTCTTCCACTGTGAACAATGATATTGATAATGTCAATACTAACTCCCAAAGGACTGGAGATGATAAAGATAAGGCTAGGTTAGCCTTACGAGATGAAGACTTGGGGCTTATTGAAGGAGACATGTGTGCATCATCAACTGGGGTGGTAAGGGTGCAGTCAAGGAAGAAAGCAGAGATGTTCTTAGTACGAACAGATGGATTTTCTTGTGCAAGAGAGAGGGTGAGTGAATCCTCTTTGGCCTTTACTCATCCCAGCACCCAGCAACAGATGCTATTGTGGAAATCTACGCCAAAGACTGTTTTACTGTTGAAAAAGCCAGGAGAGCATCTCATGGAAGAAGCTACAGAGGTAGTATTTTCTTTTTCTGTTTAG 2118 0.4292 MLAHTLCTCHMVFSVDRITPTMVSVFSGIDNARVLAFRFQFRRNTHLLTAQLSNSFSNFGFDSLSQVLNSDQSHVPSRLPWMGPFPGDIAEVEAYCRIFRNSERLHSALRDALWNPITGEFSVSYEVPSDEKQFLEDKIVSVIGCIVALVDSGRQDLLSGRSSIVTPFRATEVAVMEDTLPPLALFRSEMKRCCENLHVALENYIIPGDDRNLDVWRKLQRLKNVCYDSGFPRGEDDPCSLLFANWSPVYLYSSIEDMESKESEPAFWTGGQVTEEGINWLLDKGYKTIIDLREEDVKDSFYQATVYDAISSGRIELVRIPVKDRAAPTREQVVRFASYVSDCSKRPIYLHSKEGIWRASAMVSRWRQYVTRSTSQFVSNQAVISNTMLLDYTNGSGKMQDSMIAELSFQEKDTNLPQEGGTHGSTGSFDLCNSLKKNNGKTQSNGGISQLTPDSRASSQATGATGEGSFPSFSSKTSPLEAQVPPFDIFSKKEMSKFFGSRKISKPSYFSYQVKRLECLPDARSSEPKIVGPAKSSNGSARSHNIVGSNWKLVNVNNSSSVWTTVNGYSEGEMNYRADANISSTVNNDIDNVNTNSQRTGDDKDKARLALRDEDLGLIEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCARERVSESSLAFTHPSTQQQMLLWKSTPKTVLLLKKPGEHLMEEATEVVFSFSV* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1340 705 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 265 369 IPR029021 -
Pvu9g1340 705 MobiDBLite consensus disorder prediction 414 479 - -
Pvu9g1340 705 PANTHER NAD/NADH KINASE FAMILY PROTEIN 29 700 - -
Pvu9g1340 705 PANTHER NAD KINASE 29 700 - -
Pvu9g1340 705 Gene3D Protein tyrosine phosphatase superfamily 257 389 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1340 Pvu-Chr9 19107827 19110343 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1340 K00858 - gmx:100796381 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1340 9 19107827 19110343 Pvu9g1340 9 19107827 19110343 ECH
Pvu1g0728 1 9363102 9369873 Pvu9g1340 9 19107827 19110343 PCT