Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0728 ATGGTAGCATGCATCGACATGGCATTCTCGACGGACATAGCCACTGCTCTGTCACCTTCGTATCACTGTTTCTTTAAGCCTCCTCCGTCGTTCTTAGGCCTGGGCTTGGGCCTGGAGTTTCAGAGGAAGGGAAGAAGGCGCCGTAGACACTTCAACTTGGTCATCAGCGCCCAATTTTCCAACAACTCCTTCAGTTTCGGTCTAGACTCTCCGAATTTAAATTCCTTCCAATCCAATGATACACCACGGCTATCTTGGATGGGTCCAGTTCCAGGTGATATTGCTGAAGTCGAGGCGTTTTGTAGGATCTTTAGGAATTCAGAAAGGCTTTATTCTGCATTAATGGATGCATTATGTAACCCATTGACTGGTGAGTGTAGTGTTTCATATGAGGTTCCATCAGATGAGAAACCTCAACTAGAAGATAAAATAGTTTCTGTCCTTGGATGCATGGTATCCCTTGTGAACAAAGGAAGGGAGGATATTCTTTCTGGAAGATCCTCAATTATGAATTCCTTTCGTGCTGCAGATGTTAGCACAACAGAGGATAAGCTCCCCCCACTTGCCCTTTTTAGGAGTGAGATGAAAAGGTGTTCTGAAAGCTTGCATGTAGCTCTCGAGAACTTTTTAATACTTGATGATGATCGAAGCTTAAATGTATGGAGGACACTTCAAAGACTGAAGAATGTCTGCTATGATTCTGGTTTTCCTCGTGGAGAGGGTTTTCCTTGTCACTCACTATTTTCAAATTGGAATCCTGTATGTTTATCTGCTTCTAAAGAGGACATGGATACCAAAGAGACAGAAGCAGTCTTTTGGACTGGTGGTCAGGTAACAGAAGAAGGCCTGAAGTGGTTACTGGATAAAGGATATAAAACCATTATAGATCTCAGAGCAGAGACTGTAAAAGATAATTTCTATCAAGCGGCTTTAGATGATGCTATTTCATCTGGAAGAATTGAATTGGTAAAAATCCCAGTGGAAGCTAGGACTGCACCTACAATGGAACAGGTTGTGAGGTTTGCATCTTATGTTTCAAATTGCAGCAAAAGGCCTATCTATCTTCACAGCAAGGAAGGAGTTTTAAGAACATCTGCTATGGTCTCCCGATGGAGGCAGTACATGTCTCGTTCTTCATCGCAGATTGTTTCTAATCCACCAGTTACACCCTATGACATGTTATCACGTTATACAAATGAATCTGCTAAACTTCAGGATTCTTCAGTGACTGCAGAGAGAACCTCCCTGGAAAAGGATTTCAATTCATTGCCTGAGAATTTGAACTCAGCACATAGTTCTGTTGGAACATTTGACAGAAGTACCTCTCAAAAGAAGTATAACGGTAAAGCACAAGGTACTACAGTCTTGAGTGAAGTTTCGACTGATAACAGGAAATTATCAGAAGCCACTTCTGCTAATGCGGAAGGATCTTTTCCAAGTGACTTCAGCAAAATTAACCCTTTAAAATCTCAATTTCCTCCTTGTGATATCTTTTCCAAAAGAGAGATGTCAAAATTTTTGGGAAGCCGAAAGATCTCACCACCCTCTTATGTCAATTATAAGAGTAGAAGGTTGGAATGCTCTCTGCAACCAGGGAACATGAATATCACAAGACTACAGGGAGGTGTGGGTGTCAGCAGTAGTGATAATCCCATACCTAAAATAGTAGGTCCAGAAAGTTCAAATCGATCAGCCCATGTTGACTATCCATCTAGAGAGTCCCAGATTACAGTTGATGGCAATTGGAAGTTAGTGAAGGGGAGTACTTCTAGTTCTGTTAGGGCAACAGTAAATGGATTTAGTAAACATGAATACATGACTAATGGCAATGGTTCCAACATTGTGAAGAATAATTTTGATGATGTCACAGCTAACTCTCAAAGGCTTGAAGATCATATGGTTAAAGATAGGTTAGCCTTAAATGATGATGACTTGGGATCCATTGAAGGAGATATGTGTGCTTCTTCAACAGGAGTTGTAAGAGTGCAATCAAGAAAGAAGGCTGAGATGTTCCTGGTTCGAACAGATGGATTTTCTTGTACCAGAGAAAAAGTGACTGAATCTTCTTTGGCTTTCACTCATCCTAGCACCCAGCAGCAGATGCTTATGTGGAAGTCTACGCCGAAGAATGTATTATTGTTAAAAAAACTTGGGGATGAACTAATGGAAGAAGCAAAAATGGTTGCTTCTTTTCTTAATCGCCAAGAGAAAATGAATGTTCTTGTGGAACCTGATGTGCATGACGTATTTGCTAGAATTCCTGGCTTTGGATTTGTTCAGACCTTCTACAGTCAAGATACCAGTGATCTACATGAACAAGTAGATTTTGTGGCATGCTTGGGTGGAGATGGCGTTATACTGCATGCATCAAATCTATTCAGAGAAGCGGTTCCCCCTATTGTGTCATTTAACCTAGGCTCCCTTGGTTTTCTAACTTCTCATTATTTTGAGGATTACAAGCAAGACTTACGACAAGTCATTCATGGAAATAATACACGAGATGGTGTGTATATTACTCTCAGAATGCGTCTCCGATGTGAAATTTTCCGTAAAGGTAAAGCAATACCAGGGAAAGTATTTGACATCCTCAATGAGGCTGTTGTTGATCGGGGCTCCAATCCATACCTTTCAAAGATTGAATGCTATGAACATGATCGTCTAATAACCAAAGTACAAGGTGATGGAGTCATCGTGGCCACCCCAACAGGAAGTACTGCCTATTCTACTGCTGCTGGAGGTTCCATGTAA 2748 0.4119 MVACIDMAFSTDIATALSPSYHCFFKPPPSFLGLGLGLEFQRKGRRRRRHFNLVISAQFSNNSFSFGLDSPNLNSFQSNDTPRLSWMGPVPGDIAEVEAFCRIFRNSERLYSALMDALCNPLTGECSVSYEVPSDEKPQLEDKIVSVLGCMVSLVNKGREDILSGRSSIMNSFRAADVSTTEDKLPPLALFRSEMKRCSESLHVALENFLILDDDRSLNVWRTLQRLKNVCYDSGFPRGEGFPCHSLFSNWNPVCLSASKEDMDTKETEAVFWTGGQVTEEGLKWLLDKGYKTIIDLRAETVKDNFYQAALDDAISSGRIELVKIPVEARTAPTMEQVVRFASYVSNCSKRPIYLHSKEGVLRTSAMVSRWRQYMSRSSSQIVSNPPVTPYDMLSRYTNESAKLQDSSVTAERTSLEKDFNSLPENLNSAHSSVGTFDRSTSQKKYNGKAQGTTVLSEVSTDNRKLSEATSANAEGSFPSDFSKINPLKSQFPPCDIFSKREMSKFLGSRKISPPSYVNYKSRRLECSLQPGNMNITRLQGGVGVSSSDNPIPKIVGPESSNRSAHVDYPSRESQITVDGNWKLVKGSTSSSVRATVNGFSKHEYMTNGNGSNIVKNNFDDVTANSQRLEDHMVKDRLALNDDDLGSIEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSTPKNVLLLKKLGDELMEEAKMVASFLNRQEKMNVLVEPDVHDVFARIPGFGFVQTFYSQDTSDLHEQVDFVACLGGDGVILHASNLFREAVPPIVSFNLGSLGFLTSHYFEDYKQDLRQVIHGNNTRDGVYITLRMRLRCEIFRKGKAIPGKVFDILNEAVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSM* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0728 915 Pfam ATP-NAD kinase C-terminal domain 863 914 - -
Pvu1g0728 915 Gene3D - 859 915 IPR017437 GO:0003951|GO:0019674
Pvu1g0728 915 Pfam ATP-NAD kinase N-terminal domain 748 829 IPR002504 GO:0003951|GO:0006741
Pvu1g0728 915 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 713 915 IPR016064 -
Pvu1g0728 915 Gene3D Protein tyrosine phosphatase superfamily 263 401 IPR029021 -
Pvu1g0728 915 PANTHER NAD/NADH KINASE FAMILY PROTEIN 40 915 - -
Pvu1g0728 915 PANTHER NAD KINASE 40 915 - -
Pvu1g0728 915 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 272 383 IPR029021 -
Pvu1g0728 915 Gene3D - 705 858 IPR017438 -
Pvu1g0728 915 MobiDBLite consensus disorder prediction 422 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0728 Pvu-Chr1 9363102 9369873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0728 K00858 - gmx:100782844 1551.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0728 1 9363102 9369873 Pvu1g0728 1 9363102 9369873 ECH
Pvu1g0728 1 9363102 9369873 Pvu9g1340 9 19107827 19110343 PCT