Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1318 ATGCCAGCTTCTCCTTCAGAGAACCGAACCAGATGGAGGAAGCGCAAGAGAGATTCGCAAATCGCTCGGCGCCATCCCAAGCACGAGGAGGACGAGGAGGAAGACGAGGAAAATCCCAATGCGGAGGACGACCATGCGGAACGCGAGTACGATTCCGAAGAACAAACGCACCACCACCAAAACCACCCTAATTCGCAACCGCACGTGGAGACGGAGGTCCTCTCCGACCATGGCGTGCTCATTTCGCAGTTCCCGGCGGTGGTAAAGCGCTCCGTGAACCGCCCTCACTCCTCCGTCACCGCAATCGTGGCTCTGGAGCGAGCTCTTGAGTCTGGAGACAACAAGGCTCAGAGCGCTCTCACTCCTCCTGTTCTCGAAAACGTGTCTTATGGCCAGCTTCAAGCGCTGTCGTCTGTGCCGTCTGATAATTTCGCTTTTGACGGTGATTCCTCTTTTGTCATCACTCCCCCTGCCATATTGGAAGGTCGTGGCGTTGTTAAGCGCTTTGGAGCTAAGGTTCTTGTGGTTCCAATGCATTCAGATTGGTTTTCGCCTGCCACCGTGCACAGGTTAGAGAGGCAAGCAGTGCCGCATTTCTTTTCAGGGAAATCACCGGATCATACCCCGGAGAAGTACATGGAGTGTAGGAACTGCATTGTTGCGTTGCATTTGGAGGAGCCTGGGAAGAGGATTACGGTTTCTGATTGCCAGGGTTTGTTGACTGGGGTTGATGTTGAAGATTTGACTCGGATTGTGAGGTTCCTTGATCATTGGGGAATTATTAATTACTGTGTTCAGATGCCGAGTCTCGAGTCTCCCAATGTTATGTCTTGCCTGAGGGAGGAGCCTAGTGGAGAGGTCCGTGTACCGGCAGAGGCTTTGAAATCTATTGATAGTTTGATCAAATTTGACAATCCCATTTGTAAGCTGAAAGCAGACGAAATTTATTCGTCATTGACTGCACACAATGCCGATTTCTTTGATCTGGAGGACAGAATAAGAGAGCATCTATCGGAGAATCATTGCAATTATTGTTCTCGTCCTCTTCCTGTTGTATACTACCAGTCTCAAAAAGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGGAGATTTGTCATTGGTCATTCAAGTATAGATTTTTTAAGGGTGGATTCGACAAGGGATTATGGTGAACTAGACGGGGATAATTGGACTGATCAAGAAACTTTACTGCTTCTTGAAGCAATGGAGATTTACAATGAGAATTGGAACGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGCATTCTTCACTTTCTCCGTCTACCCATGGAAGATGGAAAATTGGAAAATATTAATGTTCCAAGCACCTCTGTGTCATCCAATGCAATGGATAGAGATGGTAGTGGAAGACTGCATTGTTACTCAAACGGAGATACTGCAGGGCCTGTCCATCAAATTAGAGATTCTGACAGCAGGCTTCCTTTTGCAAATTCTGGAAATCCTGTTATGGCTTTGGTTGCCTTTTTAGCCTCTGCAGTTGGACCAAGAGTAGCTGCTTCTTGTGCTCATGCAGCATTAGCAGTATTGTCAATGGATAATTCTGGCAACAGTTCACAGGTGGAAGCACCAGGACATGATAATAGGACAAATTCCGAAAACATACGTTGTCGAGATGGTGGGTCTCATGGAGAAACAGCGGTATCAAATAATAGTAATGAGGATAAGGCAAAGGTACATGGTTCATGGAGTCTAAATGATGGTAGGACAACCCCACTATCTGTTGAGAAAGTTAAAGATGCAGCTAAAGCAGGCCTCTCTGCAGCAGCGATGAAAGCAAAATTATTTGCCGATCATGAAGAGCGAGAAATTCAGAGGTTGTGTGCTAACATAGTTAATCATCAGCTGAAAAGATTAGAGTTGAAGCTGAAACAGTTTGCGGAAATTGAAACATTGTTGATGAAAGAATGCGAACAACTGGAGAGAACAAAGCAAAGGTTTGCTGCTGAACGGTCTCGTGTAATATCAGCACGTCTTGGAGCTGCCGGAGCCGCACCCACAATGACTACATCGGGTGTTGGTCCTTCAATGGCTAGCAACGGCAACAACAGGCAACAAATGATCTCTGTTTCTCCCTCACAGCCCAGCATCTCAGGGTATGGCGGCAACCAACCAGTTCATCCGCATATGTCCTTTGCCCCACGACCTTCGATGTTTGGGTTGGGGCAAAGATTACCGCTGTCTATGATACAACAATCACAATCAGCTTCTTCAACTGCCATGTTCAATGCCCCCGGTAATGTGCAGCCCACAACCAATCATCCATTGTTGAGGCCTGTATCAGGAACTAACTCTGGTTTAGGTTAA 2364 0.4666 MPASPSENRTRWRKRKRDSQIARRHPKHEEDEEEDEENPNAEDDHAEREYDSEEQTHHHQNHPNSQPHVETEVLSDHGVLISQFPAVVKRSVNRPHSSVTAIVALERALESGDNKAQSALTPPVLENVSYGQLQALSSVPSDNFAFDGDSSFVITPPAILEGRGVVKRFGAKVLVVPMHSDWFSPATVHRLERQAVPHFFSGKSPDHTPEKYMECRNCIVALHLEEPGKRITVSDCQGLLTGVDVEDLTRIVRFLDHWGIINYCVQMPSLESPNVMSCLREEPSGEVRVPAEALKSIDSLIKFDNPICKLKADEIYSSLTAHNADFFDLEDRIREHLSENHCNYCSRPLPVVYYQSQKEVDILLCTDCFHDGRFVIGHSSIDFLRVDSTRDYGELDGDNWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSTSVSSNAMDRDGSGRLHCYSNGDTAGPVHQIRDSDSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSMDNSGNSSQVEAPGHDNRTNSENIRCRDGGSHGETAVSNNSNEDKAKVHGSWSLNDGRTTPLSVEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQLERTKQRFAAERSRVISARLGAAGAAPTMTTSGVGPSMASNGNNRQQMISVSPSQPSISGYGGNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSASSTAMFNAPGNVQPTTNHPLLRPVSGTNSGLG* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1318 787 Coils Coil 616 636 - -
Pvu9g1318 787 Gene3D - 180 267 IPR036388 -
Pvu9g1318 787 MobiDBLite consensus disorder prediction 750 787 - -
Pvu9g1318 787 MobiDBLite consensus disorder prediction 563 579 - -
Pvu9g1318 787 Pfam SWIRM domain 177 263 IPR007526 GO:0005515
Pvu9g1318 787 Pfam Myb-like DNA-binding domain 399 441 IPR001005 -
Pvu9g1318 787 SMART sant 396 444 IPR001005 -
Pvu9g1318 787 Gene3D - 396 446 - -
Pvu9g1318 787 ProSiteProfiles Myb-like domain profile. 392 442 IPR001005 -
Pvu9g1318 787 Pfam SWIRM-associated region 1 603 681 IPR032451 -
Pvu9g1318 787 ProSiteProfiles Zinc finger ZZ-type profile. 337 391 IPR000433 GO:0008270
Pvu9g1318 787 PANTHER SWI/SNF COMPLEX-RELATED 62 786 - -
Pvu9g1318 787 ProSiteProfiles SWIRM domain profile. 174 272 IPR007526 GO:0005515
Pvu9g1318 787 MobiDBLite consensus disorder prediction 1 68 - -
Pvu9g1318 787 CDD SANT 399 441 IPR001005 -
Pvu9g1318 787 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 62 786 - -
Pvu9g1318 787 ProSiteProfiles SANT domain profile. 395 446 IPR017884 -
Pvu9g1318 787 MobiDBLite consensus disorder prediction 534 579 - -
Pvu9g1318 787 SUPERFAMILY Homeodomain-like 397 451 IPR009057 -
Pvu9g1318 787 MobiDBLite consensus disorder prediction 43 65 - -
Pvu9g1318 787 SUPERFAMILY Homeodomain-like 173 268 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1318 Pvu-Chr9 18900386 18908142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1318 342 438 EF-hand Containing Proteins AT3G07740 33.962 6.41e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1318 K11649 - gmx:100780440 1404.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1318 9 18900386 18908142 Pvu9g1318 9 18900386 18908142 ECH
Pvu1g0740 1 9564249 9570109 Pvu9g1318 9 18900386 18908142 PCT