Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1300 ATGGATGTGAAAATTAGGAGAATTTCACTCTTTTTGCTTCTTTCTTCCATTTTCTTAACCTCTTTCTCAGAAACCGATCAGGTTCTCAACTCCAAGAAGCCAACACCTTCAACCTCTGTCCACTCCCCTGCTTCCTCTTTCGCTTTTCAGATTAAAGGAAATGTTTATCCAATTGGGTATTACACGGTGAACCTTGCCATTGGTAATCCCCCTAAGCTTTATGATCTTGACATTGACACAGGAAGTGATCTCACTTGGCTTCAGTGTGATGCACCATGTAAAGGGTGCACTATACCTCACAATCGACTTTATAAACCCCGCGGAAACCTGGTGAAATGTGTGGATCCCTTGTGTACTGGAGTCCAGTCAGCACCTCCCTGTGCTGTAACAAATGAGCAATGTGACTATGAGGTTGAGTATGCAGACCAAGGATCATCTCTGGGTGTGTTAGTCCGAGATTATGTTCCAGTTAAATTTACTAATGGATCTTTAGCACGCCCTATTCTGGGCTTCGGGTGTGGATATGATCAAACGCATCCTGGTCATAATCCCCCACCTATCACAGCAGGTGTTCTTGGCCTTGGAAATGGCAGAGCAAGCATTGTATCCCAGCTTCATTCTCTTGGCATGATTCGCAATGTAGTAGGCCACTGCTTAAGTGGGAGAGGAGGAGGTTTTTTATTCTTTGGAGATCAGTTTATTCCCCAATCTGGAGTTGTTTGGACACCCATATTGCAAAGTTCCTCAGTACAACACTATAAAACAGGTCCAGCAGACCTGCTTTTCGATGGAAAGCCTACTTCTGTGAAAGGTCTAGAACTTGTGTTCGATAGTGGGAGCTCCTACACATACTTCAATTCCCGAGCTCATAGAGCTCTTGTTGATCTGATAACTAATGATATAAAGGGGAAGTCGTTGACTAGAGCAACTGCGGATCCATCTCTCCCAATTTGTTGGAAGGGTCCAAAGCCTTTCAAATCCTTACATGATGTCACCAGAAATTTTAAGCCACTGGTACTCAGCTTCACAAAATCAAAGAACTCGCAGCTGCAAGTACCACCAGAAGCTTATCTAATTGTCACTAAACATGGCAATGTCTGCTTGGGGATTTTAGATGGCACTGAAGTAGGAATGGGAAATATCAACATAATTGGAGATATATCTTTACAGGATAAGATTGTGATTTATGACAACGAGAAACAGCAGATTGGATGGGCATCTGCTAAGTGTGATGGACCTTCCAAGTCATAA 1251 0.4317 MDVKIRRISLFLLLSSIFLTSFSETDQVLNSKKPTPSTSVHSPASSFAFQIKGNVYPIGYYTVNLAIGNPPKLYDLDIDTGSDLTWLQCDAPCKGCTIPHNRLYKPRGNLVKCVDPLCTGVQSAPPCAVTNEQCDYEVEYADQGSSLGVLVRDYVPVKFTNGSLARPILGFGCGYDQTHPGHNPPPITAGVLGLGNGRASIVSQLHSLGMIRNVVGHCLSGRGGGFLFFGDQFIPQSGVVWTPILQSSSVQHYKTGPADLLFDGKPTSVKGLELVFDSGSSYTYFNSRAHRALVDLITNDIKGKSLTRATADPSLPICWKGPKPFKSLHDVTRNFKPLVLSFTKSKNSQLQVPPEAYLIVTKHGNVCLGILDGTEVGMGNINIIGDISLQDKIVIYDNEKQQIGWASAKCDGPSKS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1300 416 Gene3D Acid Proteases 36 231 IPR021109 -
Pvu9g1300 416 ProSiteProfiles Peptidase family A1 domain profile. 61 406 IPR033121 -
Pvu9g1300 416 Gene3D Acid Proteases 232 412 IPR021109 -
Pvu9g1300 416 PRINTS Pepsin (A1) aspartic protease family signature 67 87 IPR001461 GO:0004190|GO:0006508
Pvu9g1300 416 PRINTS Pepsin (A1) aspartic protease family signature 274 285 IPR001461 GO:0004190|GO:0006508
Pvu9g1300 416 PRINTS Pepsin (A1) aspartic protease family signature 382 397 IPR001461 GO:0004190|GO:0006508
Pvu9g1300 416 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 413 - -
Pvu9g1300 416 PANTHER ASPARTYL PROTEASES 8 413 IPR001461 GO:0004190|GO:0006508
Pvu9g1300 416 SUPERFAMILY Acid proteases 54 410 IPR021109 -
Pvu9g1300 416 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 274 285 IPR001969 GO:0004190|GO:0006508
Pvu9g1300 416 Pfam Xylanase inhibitor C-terminal 273 406 IPR032799 -
Pvu9g1300 416 Pfam Xylanase inhibitor N-terminal 61 231 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1300 Pvu-Chr9 18685076 18688028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1300 31 411 Miscellaneous Gene Families AT1G44130 57.812 1.93e-167 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1300 - - gmx:100803640 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0746 1 9706299 9711569 Pvu9g1300 9 18685076 18688028 PCT