Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0746 ATGGATTTTAGAAGCAAGGGAATAACATTGCACTCGCTTTTCGTATCATTTCTTCTATTTTCTGCCATTTTCCCACTCTCTTTCTCAGCAGCCAATCAACCCCACAAAGTCAAGAACCTCGCCACCCCACGTCGCCTTTCCTCCTCAGCTGTTTTCAAAGTTCAGGGAAATGTGTACCCTCTTGGGCATTACACAGTGTTTTTCAACATTGGCCATCCGCCCAAGTTTTACGACCTTGACATAGATTCGGGTAGTGACATCACTTGGGTTCAATGTGATGCACCATGTAAAGGTTGCACCAAGCCTCGTGTGCAACTTTATAAACCCAATCACAACCTTGTGCAATGTGTGGACCAACTGTGTTCTGAAGTGCACTTATCAACAGACCATAATTGTGCTTCCCCAGATGACCAATGTGACTATGAAGTTGAGTATGCAGATAATGGATCATCTCTGGGTGTGCTAGTCCGGGACCACATTGCTTTTCAATTCACCAATGGCTCTGTGGTGCACCCTAAGATTGCCTTTGGGTGCGGATATGATCAAAAGTATTCTGGTTCTACCTCCCCACCTTCTACGGCAGGAGTCCTTGGCCTTGGCAACGGCAGAGCTAGCATATTAACTCAGCTTCATTCTTTGGGTCTGATACGCAATGTAGTTGGACACTGCCTAAGTGCAAGAGGAGGAGGGTTTTTATTCTTTGGAGATGATCCCGTTCCCTCTTCAGGAATTGTTTGGACATCCATGGTGCATAGTTCTTCGGAAAAACACTACAGCTCAGGACCAGCAGAGCTGTTGTTCAATGGAAAGACTACTAAAGTTAAGGGTCTTGAACTTATCTTCGATAGTGGGAGCTCTTACACATACTTCAACTCCCTTGCGTATCAAGCTGTTGTAAATTTGGTGACTGATGATTTAAAGGGGAAACAGTTGACAAGAGCAACCGAGGATTCATCACTTCCAATTTGTTGGAAGGGTCCAAAATCTTTCAAATCGTTAAGTGATATCAAGAAATACTTCAAACCCCTTGCATTTAGCTTCACAAAAACTAAGAATGTGCAGATGCAGCTACCGCCAGAAGCTTATCTTATTATCACTAAACATGGCAATGTTTGCTTGGGGATTCTAGATGGCACTGAAGTAGGACTAGAAAGTCTCAACATAATCGGAGCTGACAGATCACCACTCAGCTCTGCATTTTCATATGTAAGTTTAGTCACTTCTTCAGCCAGGTTTCGGAGTTCAACTGCTGCAGCTGCTGCCAGCTCTTTTGCGTATGAAGCTTCCTCTGCAAGTTTCTGA 1302 0.4416 MDFRSKGITLHSLFVSFLLFSAIFPLSFSAANQPHKVKNLATPRRLSSSAVFKVQGNVYPLGHYTVFFNIGHPPKFYDLDIDSGSDITWVQCDAPCKGCTKPRVQLYKPNHNLVQCVDQLCSEVHLSTDHNCASPDDQCDYEVEYADNGSSLGVLVRDHIAFQFTNGSVVHPKIAFGCGYDQKYSGSTSPPSTAGVLGLGNGRASILTQLHSLGLIRNVVGHCLSARGGGFLFFGDDPVPSSGIVWTSMVHSSSEKHYSSGPAELLFNGKTTKVKGLELIFDSGSSYTYFNSLAYQAVVNLVTDDLKGKQLTRATEDSSLPICWKGPKSFKSLSDIKKYFKPLAFSFTKTKNVQMQLPPEAYLIITKHGNVCLGILDGTEVGLESLNIIGADRSPLSSAFSYVSLVTSSARFRSSTAAAAASSFAYEASSASF* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0746 433 PANTHER ASPARTYL PROTEASES 2 393 IPR001461 GO:0004190|GO:0006508
Pvu1g0746 433 ProSiteProfiles Peptidase family A1 domain profile. 64 420 IPR033121 -
Pvu1g0746 433 Pfam Xylanase inhibitor N-terminal 64 236 IPR032861 -
Pvu1g0746 433 SUPERFAMILY Acid proteases 56 391 IPR021109 -
Pvu1g0746 433 Gene3D Acid Proteases 39 236 IPR021109 -
Pvu1g0746 433 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 393 - -
Pvu1g0746 433 Pfam Xylanase inhibitor C-terminal 277 391 IPR032799 -
Pvu1g0746 433 Gene3D Acid Proteases 238 392 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0746 Pvu-Chr1 9706299 9711569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0746 44 390 Miscellaneous Gene Families AT1G77480 59.770 2.86e-156 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0746 - - gmx:100790299 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0746 1 9706299 9711569 Pvu1g0746 1 9706299 9711569 ECH
Pvu1g0746 1 9706299 9711569 Pvu9g1300 9 18685076 18688028 PCT