Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1026 ATGACGAATGATAAAGTGGTTGATGAAGGTGAGAAGAAAGAGAACGGTGGTACGAGCCCCTCTGGAAGTGGGAAGAAGAAGCGCAGAGGCTTTTTATCGCGAATTTGGAACAGGATATTTAGGTTACACGGTGATGATTTTGAGAAAAGGCTCCAATACATTTCTAAAGAGGAGGCTCAGGTTATGTCTAGGATAGCCAAGAGATCACGATCCTGGAGGAGAATTTCCCGCCATCTTATCGTGTTTTCTGTCATATTTGAGGTTGTTGCTGTAGTTTATGCTGTTATGACAACAAGATCAATTGATATGGATTGGAAAATGAGGGCAATTCGTGTTTTGCCAATGTTTCTTGTGCCTGCACTGGCATCTGCTGCCTATACAGCATTTATAAGCTTCACAAGAATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGCCTTCGTGCTGAAAGGCAAGAAAAAATTGATGAGCTCAAAGAAAAGACAAATTATTACACTACACAACAGCTCATTCAGAGATATGATCCAGACCCAGCTGCGAAAGCAGCTGCTGCAACTGTTTTAGCATCTAAGTTGGGTGCAGATTCTGGTTTGAGAGTGTATCTGGAAGATGAACTCAATTCTCGTGCTCCAATAGGGAAGAGCAATGATGTTGAACTTATTCAGTCCTCTGGACTTCGAAATCGGAGGCAAGTTCAATCTAGATGCACTAGTCCAAGGGCAGGCACACCAAATCCTGGTGATGAACAAGTTGGTCTTGGGGGAAGTTATCAAACTCAGACTTCTGACGACAATCAGCCTGTTGTTGTTGAACACCACCAACCTCAAAGTTCAAACACACTAGATAGTGGATGGATTGCAAGAATTGCAGCTTTGCTTGTGGGTGAGGATCCAGCACAGTCTTATGCTCTCGTATGTGGTAACTGCTATATGCATAATGGTCTAGCTCGGAAGGAGGATTTCCCATTTATCACATATTACTGCCCACACTGTCATGCCCTAAACAAACCGAAGCAATTGGATGAGCGTATCTCTAGTCTTACTTCTCCAAACACGGGGACTCCAAAAACAGACAATAGTGCCAGTGATGCATTAAAGAATATTAGGGCTTCTGCAGCCGAGAGTATAATCACAGGCAGTAGTCCTGGAAGTGCTTCTAGCTCTGAGATTGGGGAAGTAACAGAGAGGGCAAGTATGGATGAGAAAGTTGATTGA 1215 0.4346 MTNDKVVDEGEKKENGGTSPSGSGKKKRRGFLSRIWNRIFRLHGDDFEKRLQYISKEEAQVMSRIAKRSRSWRRISRHLIVFSVIFEVVAVVYAVMTTRSIDMDWKMRAIRVLPMFLVPALASAAYTAFISFTRMCDRRDQKILESLRAERQEKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLRVYLEDELNSRAPIGKSNDVELIQSSGLRNRRQVQSRCTSPRAGTPNPGDEQVGLGGSYQTQTSDDNQPVVVEHHQPQSSNTLDSGWIARIAALLVGEDPAQSYALVCGNCYMHNGLARKEDFPFITYYCPHCHALNKPKQLDERISSLTSPNTGTPKTDNSASDALKNIRASAAESIITGSSPGSASSSEIGEVTERASMDEKVD* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1026 404 MobiDBLite consensus disorder prediction 226 244 - -
Pvu9g1026 404 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 15 401 IPR040115 GO:0071786
Pvu9g1026 404 MobiDBLite consensus disorder prediction 1 15 - -
Pvu9g1026 404 Coils Coil 141 164 - -
Pvu9g1026 404 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 285 335 IPR019273 -
Pvu9g1026 404 MobiDBLite consensus disorder prediction 373 393 - -
Pvu9g1026 404 MobiDBLite consensus disorder prediction 344 404 - -
Pvu9g1026 404 MobiDBLite consensus disorder prediction 1 27 - -
Pvu9g1026 404 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 15 401 - -
Pvu9g1026 404 MobiDBLite consensus disorder prediction 344 366 - -
Pvu9g1026 404 MobiDBLite consensus disorder prediction 252 280 - -
Pvu9g1026 404 MobiDBLite consensus disorder prediction 226 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1026 Pvu-Chr9 15285153 15289004 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1026 K23292 - gmx:100797087 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0594 1 6761928 6766797 Pvu9g1026 9 15285153 15289004 PCT