Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0594 ATGGGGGACGAGAAAGGTGAGGCCAAAGAAGCTAGTGCTGTCAAGGAGAGTACCGAGGACAATGCGGAGAACACGAAGAAACAGAAGAAGAAGGGCTTTTTTTCGCGATTGTGGAATGCCTTATTCAGCTCCAACAAAGACGATTTCGAGAAGAGGCTTCAGTGTATCACCAAAGAAGAAAATACTGTTGTTGCCAGAATGAGCAACAGATCTCGCTCTTGGAGGCGAACCTCTCGCCAGCTTATTTTATTCTCCATTCTGTTCGAGGTCATTGCTGTAGGTTATGCTATTATGACAACAAGATCAATGGATATGAATTGGAAAATGCGGGCAATCCGAGTTTTGCCAATGTTTCTTTTACCTGCCTTGTCAACTGCTACATATTCAGCATTCGTCAGTTTCACAAGGATGTGCGATCGCAAGGACCAGAAAATTCTTGATAGGCTTAGAGCTGAAAGGAAAGCAAAAATTGATGAGCTCAAAGAGAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGACACGGATCCAGCAGCAAAAGCAGCCGCTGCAACTGTTTTAGCATCTAAGTTGGGTTCAGATTCTGGTTTGAATGTGTATGTGGAGAATGAATCTTCTGGTGCTCCAACTGGGAAGACCAAGGATGTTGAAGTTGTACAGTCAACCGGACTTCGAAATCGCAAGCAAGTGAACTCTAGATCCACTAGTCCAGGGACAAATACAACAAATTATTCTGATCAACAATTAGTTGGTTCTGGGAAAATTAATCAAACTCAAACTCCTGAGCATAATGAGCTTGTAGTTGTTGAACATCTTCCTCAAAGTTCAGCAATGAATGATGGAGGGTGGATTGCTCGAATTGCAGCATTGCTTGTGGGGGAGGATCCCACGCAGTCTTATGCACTCATATGTGGTAATTGCCATATGCACAATGGTCTTTCTCGGAAGGAGGATTTCCCATTCATTACCTATTACTGCCCACACTGTCACGCCTTGAACAAACCAAAGCAATCGGATGAACATATATCTTTCCCAAACACCACTAGTTCTCCAAAAGCACATGATGGCGAAGAAGTCCAAAAAGCTGGTGCTTCTGACAGCTTAATCGTAAGTGACAATCCTGTAAAAGCTACCCCTGAGATTGAGGAAGTATCTGACCGGGCTGCTTCAGGGGAAGAAAGCTAG 1194 0.433 MGDEKGEAKEASAVKESTEDNAENTKKQKKKGFFSRLWNALFSSNKDDFEKRLQCITKEENTVVARMSNRSRSWRRTSRQLILFSILFEVIAVGYAIMTTRSMDMNWKMRAIRVLPMFLLPALSTATYSAFVSFTRMCDRKDQKILDRLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGSDSGLNVYVENESSGAPTGKTKDVEVVQSTGLRNRKQVNSRSTSPGTNTTNYSDQQLVGSGKINQTQTPEHNELVVVEHLPQSSAMNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLSRKEDFPFITYYCPHCHALNKPKQSDEHISFPNTTSSPKAHDGEEVQKAGASDSLIVSDNPVKATPEIEEVSDRAASGEES* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0594 397 MobiDBLite consensus disorder prediction 382 397 - -
Pvu1g0594 397 MobiDBLite consensus disorder prediction 342 356 - -
Pvu1g0594 397 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 286 336 IPR019273 -
Pvu1g0594 397 Coils Coil 146 166 - -
Pvu1g0594 397 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 15 394 IPR040115 GO:0071786
Pvu1g0594 397 MobiDBLite consensus disorder prediction 339 397 - -
Pvu1g0594 397 Coils Coil 8 28 - -
Pvu1g0594 397 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 15 394 - -
Pvu1g0594 397 MobiDBLite consensus disorder prediction 1 29 - -
Pvu1g0594 397 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0594 Pvu-Chr1 6761928 6766797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0594 K23292 - gmx:100815496 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0594 1 6761928 6766797 Pvu9g1026 9 15285153 15289004 PCT