Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1001 ATGCTGAAGCAATTCCTCAGCAGACTCCCCCGCAAGACACCGAAACCCGACTCGGACGAGTCATGCCGAGCCGACTCGTCGCGCTCGGACGATTCCCCACGCGCTGCCGGCAGACACAGTCGCGCGCACGGTGTTGCCGCCGCTTCGAACGCTGCGAAGCGGACATCCTCGTCCGCAGTTTTTCCGGCGAGCACGGTGTCGGTGATAGAACCTCTGGTGCCGTTCAAAGATGTTCCGAGCGCGGAAAAGATGAACCTTTTCGTGAGCAAGCTAAGCCTGTGTTGCGTGTCGTTCGATTTCAGGGACCCTGTTAAGAACACGGTGGAGAAAGAGGTGAAGAGAAAAACCCTTGTTGAACTCGTTGATTTTGTTTCCTCTTGTGGGTCCTCGAGGTTTGGTGAACCTGCTATTCTCGCTGTGTGTAGAATGTGTGCTATTAATCTCTTTCGCGTTTTTCCGCCGAATTATAGGTCTAATCGTGGTGGTGAGAATGAGGATGATGAGCCAGCGTTTGATCCCGCTTGGCCTCATTTGCAGCTAGTGTATGAGTTGCTGCTCAAGTTTATAACCTCAAACTGTCTTGATGCTAAGGTGGCCAAGAAGTACATTGACCATTCTTTTATTTTAAGGTTGTTGGAGTTGTTTGATTCGGAGGATCCTAGGGAGAGGGACTGCTTGAAGACCATTATGCATAGGGTTTATGGCAAGTTCATGGTTCATAGGCCCTACATAAGGAAATCCATTAACAACTTGTTTTTTAAGTTTGTGTTTGAGACTGAGAGGCACAATGGGATTGCCGAGTTGTTGGAGATTTTTGGAAGCATAATTAGCGGGTTCGCTTTGCCTTTGAAGGAGGAGCACAAGATCTTCTTGTGGAGGGTTTTGATCCCCTTGCACAAGCCCAAATCTATGGGGGTGTACTTCCAGCAGTTGTCTTACTGCGTTACACAGTTCGTCGAGAAAGAGCCTAAGTTGGCGAGCATTGTTATCAGGGGGTTGTTGAAGTATTGGCCGATAACCAATAGTCAGAAAGAAGTGATGTTCCTGGGTGAACTGGAAGAAATTTTGGAAACAATTAACATGGTAGAGTTCCAGAGGGTCATGGTACCGTTGTTTTGGCGGATTGGATGCTGTATTAACAGCATGCACTTTCAGGTAGCTGAAAGAGCCCTTTTCTTATGGAACAACGATCATATTGTGAACTTGATTGCTCACAACCGACAAGTGATCCTGCCAATAGTGTTTCCAGCCTTAGAGAAGAATTCTCAGGGCCACTGGAGCCAAGCAGTGCTCAACCTAAGTCATAATGTTAGAAAAATGTTTGCAGAGATGGATGAGAAGCTATTCCTGGCTTGTCATTCTCAGTTTAAGGAAGAAGAAGCAATGCTAAATGCGGCCGCAGAGAAGCGGAAGGAAGCTTGGAAACAACTAGAGCATGCAGCCAGTCTGCAGCCTGTGATTGGAAATACCGCAGTTTTAGTGTCTCCAATTTGA 1494 0.4746 MLKQFLSRLPRKTPKPDSDESCRADSSRSDDSPRAAGRHSRAHGVAAASNAAKRTSSSAVFPASTVSVIEPLVPFKDVPSAEKMNLFVSKLSLCCVSFDFRDPVKNTVEKEVKRKTLVELVDFVSSCGSSRFGEPAILAVCRMCAINLFRVFPPNYRSNRGGENEDDEPAFDPAWPHLQLVYELLLKFITSNCLDAKVAKKYIDHSFILRLLELFDSEDPRERDCLKTIMHRVYGKFMVHRPYIRKSINNLFFKFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSMGVYFQQLSYCVTQFVEKEPKLASIVIRGLLKYWPITNSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCINSMHFQVAERALFLWNNDHIVNLIAHNRQVILPIVFPALEKNSQGHWSQAVLNLSHNVRKMFAEMDEKLFLACHSQFKEEEAMLNAAAEKRKEAWKQLEHAASLQPVIGNTAVLVSPI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1001 497 Gene3D - 79 480 IPR011989 -
Pvu9g1001 497 MobiDBLite consensus disorder prediction 1 41 - -
Pvu9g1001 497 MobiDBLite consensus disorder prediction 10 38 - -
Pvu9g1001 497 SUPERFAMILY ARM repeat 85 477 IPR016024 -
Pvu9g1001 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 495 - -
Pvu9g1001 497 PIRSF PP2A_B56 4 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pvu9g1001 497 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pvu9g1001 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1001 Pvu-Chr9 14967273 14970349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1001 K11584 - gmx:100808283 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1001 9 14967273 14970349 Pvu9g1001 9 14967273 14970349 ECH
Pvu1g0569 1 6464764 6467769 Pvu9g1001 9 14967273 14970349 PCT