Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0569 ATGCTCCGGCAAATCCTCAGTAAGCTTCCTCGGAAGTCATTGAAACCCGACTCGGACGAGTCGACTTGGGGTGACTCGGCGCGTTCCGCCGACTCGCCACGCGTCGCCGGCAAAAGCCAAAGACCACATGGCGGCAGTTCCACCGCAGCGAAGCGAGCTTCGTCATCGGCGGTGTTTCCGGCGAGCATGGTTTCCGGATTTGAACCTTTGGTGCCGTTTAAGGATGTTGCTAATGCCGAGAAGATGAACCTGTTCGTGAGCAAGTTGAGCCTTTGTTGTGTCACATTTGATTTCTGTGACCCTAGTAAGAGCGTTGCAGATAAAGATGTGAAAAGGAAGACTTTGGTTGAGCTTGTTGATTTTGTGGCTTGTGGGACAGTGAGGTTTAGTGAGCCTGCTATCCTTGCTTTGTGTAGAATGTGTGCTTTCAATTTGTTTAGAGTTTTTCCTCCTAATTATAGGACAGGTGGTGGTGAGAATGACGATGATGAACCTATGTTTGATCCTGCTTGGCCACATTTGCAACTTGTGTATGAATTGCTGCTTAAGTTTATCTCTTCTTCGTGCCTCGATGCCAAGGTGGCGAAAAAGTATATTGATCATTCGTTTATTGCCAGATTGCTTGGGTTGTTTGATTCGGAGGATCCTAGGGAAAGGGATTGCTTGAAGGCGATTCTGCATAGGATTTATGGGAAGTTTATGGTGCATAGACCCTATATTCGAAAATCTATTAACAATATATTTTATCGCTTTGTGTTTGAGACTGAGAAGCACAGTGGGATCGGTGAGTTGTTGGAGATTTTTGGGAGTGTGATTACTGGGTTTGCTTTACCCTTGAAAGAGGAACACAAAATCTTCATGTGGAGGGTTTTGGTCCCCTTGCACAAGCCGAAATCAATCGGGGTCTACTTTCAGCAATTGTCTTACTGTGTTATGCAATTTATAGAGAAGGAGCCCAAGTTAGCGAGCATTGTCATAAGGGGTTTGTTGAAATATTGGCCAGCAACAAATAGTCAGAAAGAGGTGATCTTTCTGGGTGAACTTGAAGAAATTTTGGAAGTAATTAACATGGTAGAGTTCCAGAGGATCATGGTTCCTTTGTTTTGGCGGATTGGATGCTGCATAAACAGCTTACATTTTCAGGTAGCTGAAAGGGCCCTTTTCCTTTGGAACAATGACCACATTGTGAACTTGATTGCACATAACCGGCAAGTGATCCTGTCCATCATATTTCCAGCTTTAGATAGGAATGTTCAAAGCCATTGGAACCCGGCAGTTGTGAACCTAACGCACAATATTAGGAAGATGTTCTTGGAGATGGATGAGAAGCTCTTCATTTCTTGTCATAATCACTTTAAGGAGGAAGAAGCAATCTTGACCTCTGCAGCAGAGAAGCGGAAGGAGGCATGGGAACAACTAGAGCATGCCGCCAGTCTCAGGCCTGTTATTGGAAATACTGCAGTGTTAGTCTCCTGA 1476 0.4485 MLRQILSKLPRKSLKPDSDESTWGDSARSADSPRVAGKSQRPHGGSSTAAKRASSSAVFPASMVSGFEPLVPFKDVANAEKMNLFVSKLSLCCVTFDFCDPSKSVADKDVKRKTLVELVDFVACGTVRFSEPAILALCRMCAFNLFRVFPPNYRTGGGENDDDEPMFDPAWPHLQLVYELLLKFISSSCLDAKVAKKYIDHSFIARLLGLFDSEDPRERDCLKAILHRIYGKFMVHRPYIRKSINNIFYRFVFETEKHSGIGELLEIFGSVITGFALPLKEEHKIFMWRVLVPLHKPKSIGVYFQQLSYCVMQFIEKEPKLASIVIRGLLKYWPATNSQKEVIFLGELEEILEVINMVEFQRIMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILSIIFPALDRNVQSHWNPAVVNLTHNIRKMFLEMDEKLFISCHNHFKEEEAILTSAAEKRKEAWEQLEHAASLRPVIGNTAVLVS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0569 491 MobiDBLite consensus disorder prediction 1 51 - -
Pvu1g0569 491 SUPERFAMILY ARM repeat 83 472 IPR016024 -
Pvu1g0569 491 Gene3D - 78 476 IPR011989 -
Pvu1g0569 491 PIRSF PP2A_B56 6 488 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pvu1g0569 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 491 - -
Pvu1g0569 491 MobiDBLite consensus disorder prediction 10 24 - -
Pvu1g0569 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pvu1g0569 491 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 477 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0569 Pvu-Chr1 6464764 6467769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0569 K11584 - gmx:100781390 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0569 1 6464764 6467769 Pvu9g1001 9 14967273 14970349 PCT