Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0956 ATGTCTCAAGTTTTCAGCTTTTCAGGAAATGATGATTTTTGTCCTGGGGGTCGTATATATCCTAACCCCAAGGAACCATGTCTCTTTTTGTCTCTTGGCCGTTCAGTTGATTACTTTCCTCTTCAGAAGAGATCTCGCGTCAGTGTTTCATTTGATATCAATCGAGAATGGTTTGATGAGCCGAAGCAGAAGACATCTATTGAATCTTTGCCAGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGCTGGCCAAGATAGGAGCGTCTGTGCTTCTGTATCCAAGCGCTGGCTTATGCTTCTAAGCAGTATTTGTAAGAATGAAGTCTGCAGCAATGGAAGTACCGGAGATTCTAATGTGGGTGGTGATGATGATCAGGGATTTAGCAACGAAGGATATCTATCCCGAAGCTTGGAGGGAAAGAAGGCAACAGATGTTAGACTTGCTGCCATTGCTGTTGGAACAGCCTCTCGAGGAGGGCTGGGGAAGCTTACTATTCGTGGATGCAATTCAGGTCGTGGGGTGACTAACGTAGGTCTCAAGGCCATTGCTCATGGATGCCCTTCTCTAAAGGTTTTCTCAGTGTTTGATGTTGCAACTATTGATGATGAAGGCCTAATTGAGATTGCTAGCGGGTGTCATAAGTTAGAGAAGCTTGACCTCTGCAAGTGTCCCAATATTTCTGACAAGACTTTAATTGCAGTCTCGAAGAAGTGTCCAAATCTGGCTGAGTTGTCAATTGAGTCATGTCCCAACATTGGTAACATAGGTCTACAAGCTATTGGGAAGTTGTGTCCCAAACTAAGGTCTATATCAATCAAGGGTTGCTCCGGAGTTGGTGATCAGGGAGTTTGTGGCCTTTTGTCTTCAACTTCTTATGTTCTATCAAAGGTGAAGCTTGAGTCGTTGATGGTGTCTGATCTCTCTCTAGCAACGATTGGGCATTATGGCTTTCAAGTTACCGATCTTGTCCTAAGTTGCCTCCCAAATGTCACAGAGAAAGGGTTCTGGGTTATGGGTAATAGCCGTGGACTGCAGAAACTGAATTCAATCACAATCGAAGGCTGCCAAGGATTGACAGACACAGGGATCGAAGCTATTGGAAAGGGTTGTCCAAATGTGAAAAACTTCCAGCTTCGTAAGTGTGCATTTCTGTCAGACAAGGGGTTGGTTTCATTTACCAGGGCTGCTCTATCAATTGAGAGCCTACAGTTGCAGGAATGCCACAGAATTACCCAAATTGGGCTTTTTGGCGTCTTTTTTCACTGTGCTGCCAAACTGAAGGTTCTTACTCTGATTAGCTGCTATGGGATCAAAGATCTGAACGCTGATTTGCCAGCAATGTCACCTTGTGAATCATTTTGGTCTCTAACAGTCCGTGACTGCCCTGAATTTGGCGATGCTAATCTTGCTTTACTTGGAAAACTGTGTCCTCAGCTTAGACATGTTGAATTGAGTGGACTTCAGAGAGTAACAGACGCAGGGTTTCTTCCACTGCTGGAGTGTTCTGAGACTGGTCTGACAACAGTTAATCTAAGGGGATGTATAAATGTGACGGACAGAGTAGTTTTGCCTATTGTGAATTCACATGGATGGACTCTTCAGGTGCTATGCCTTGATGGTTGTAAAAGAGTCACCGATGCAAGCATGATGGCAATTGCAGGCAATTGTCCGATGCTATCTGATCTGGATGTTTCCAAGTGTGCAATCACTGATACCGGTATTGCAGCTCTTGCACGTGGAAATCAGATCAGCCTGGAGATACTTTCTTTGGCAGGTTGTATATCGGTTTCAGACAAGAGCATGCCTGCATTGAAAAAACTGGGTCAATCCCTTGCAGGATTGAATATCAAGCGTTGCAGTGCAATCAGCAGCCGAGGTGTCAGCAAGCTTCAGGAACATCTCTGGACTTGTGACATCCTCTACTGA 1932 0.4477 MSQVFSFSGNDDFCPGGRIYPNPKEPCLFLSLGRSVDYFPLQKRSRVSVSFDINREWFDEPKQKTSIESLPDECLFEILRRLPAGQDRSVCASVSKRWLMLLSSICKNEVCSNGSTGDSNVGGDDDQGFSNEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLTIRGCNSGRGVTNVGLKAIAHGCPSLKVFSVFDVATIDDEGLIEIASGCHKLEKLDLCKCPNISDKTLIAVSKKCPNLAELSIESCPNIGNIGLQAIGKLCPKLRSISIKGCSGVGDQGVCGLLSSTSYVLSKVKLESLMVSDLSLATIGHYGFQVTDLVLSCLPNVTEKGFWVMGNSRGLQKLNSITIEGCQGLTDTGIEAIGKGCPNVKNFQLRKCAFLSDKGLVSFTRAALSIESLQLQECHRITQIGLFGVFFHCAAKLKVLTLISCYGIKDLNADLPAMSPCESFWSLTVRDCPEFGDANLALLGKLCPQLRHVELSGLQRVTDAGFLPLLECSETGLTTVNLRGCINVTDRVVLPIVNSHGWTLQVLCLDGCKRVTDASMMAIAGNCPMLSDLDVSKCAITDTGIAALARGNQISLEILSLAGCISVSDKSMPALKKLGQSLAGLNIKRCSAISSRGVSKLQEHLWTCDILY* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0956 643 PANTHER UNCHARACTERIZED 16 633 - -
Pvu9g0956 643 SUPERFAMILY RNI-like 165 419 - -
Pvu9g0956 643 Pfam F-box domain 68 106 IPR001810 GO:0005515
Pvu9g0956 643 Gene3D Ribonuclease Inhibitor 506 635 IPR032675 -
Pvu9g0956 643 Gene3D Ribonuclease Inhibitor 412 505 IPR032675 -
Pvu9g0956 643 Gene3D Ribonuclease Inhibitor 127 391 IPR032675 -
Pvu9g0956 643 SMART fbox_2 70 111 IPR001810 GO:0005515
Pvu9g0956 643 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 16 633 - -
Pvu9g0956 643 SUPERFAMILY F-box domain 61 104 IPR036047 GO:0005515
Pvu9g0956 643 Pfam Leucine Rich repeat 557 580 IPR001611 GO:0005515
Pvu9g0956 643 Pfam Leucine Rich repeat 239 262 IPR001611 GO:0005515
Pvu9g0956 643 SUPERFAMILY RNI-like 302 639 - -
Pvu9g0956 643 SMART LRR_CC_2 610 635 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 398 423 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 240 265 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 346 371 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 214 239 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 372 397 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 266 291 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 505 530 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 532 557 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 188 213 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 584 609 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 478 503 IPR006553 -
Pvu9g0956 643 SMART LRR_CC_2 558 582 IPR006553 -
Pvu9g0956 643 Gene3D - 60 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0956 Pvu-Chr9 14366308 14369849 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0956 K14515 - gmx:100805418 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0956 9 14366308 14369849 Pvu9g0956 9 14366308 14369849 ECH
Pvu1g0524 1 5735774 5739460 Pvu9g0956 9 14366308 14369849 PCT