Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0944 ATGGCTTCCCTCAAACTCCTTCCCACCATTTTCCTTCTCTCTCTCATTTCTTACTCTTCATTCACTCAGGCCAATTGCCCACCCCCATCCTCCCCAAAGCCCAAGCCCTCTCCAAAGCCCACACCACCCACCATAAAGCCCACACCCTCTCCAAAGCCCACCCCACCCATCCCAAAGCCCAGCCCAAAGGCTAGTTGCCCTCCTCCTCCAACTCCATCACCATCACCGAAAGGTTCCTGCCCTAAAGACATCCTAAAGCTAGGTGTTTGTGCTAATGTCTTAGGACTTGTGCACGTTATTGTTGGGACTCCACCTTCCAGCGATTGTTGCGCTTTGATTAAAGACTTGGCGGATTTGGAAGCTGCACTCTGCCTTTGCACTGCCATTAAGGCCAATGTGCTTGGAATCAACTTGAACGTGCCTGTCGCGCTAAGCGCAATCCTCAGCGCGTGTCAGAAAACTGTCCCTTCTGGATTCAAATGCTCCTAG 489 0.5194 MASLKLLPTIFLLSLISYSSFTQANCPPPSSPKPKPSPKPTPPTIKPTPSPKPTPPIPKPSPKASCPPPPTPSPSPKGSCPKDILKLGVCANVLGLVHVIVGTPPSSDCCALIKDLADLEAALCLCTAIKANVLGINLNVPVALSAILSACQKTVPSGFKCS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0944 162 MobiDBLite consensus disorder prediction 27 77 - -
Pvu9g0944 162 PANTHER LIPID TRANSFER PROTEIN 42 162 - -
Pvu9g0944 162 PANTHER LIPID TRANSFER PROTEIN 1 30 - -
Pvu9g0944 162 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 83 161 IPR036312 -
Pvu9g0944 162 MobiDBLite consensus disorder prediction 23 79 - -
Pvu9g0944 162 PRINTS Proline rich extensin signature 27 48 - -
Pvu9g0944 162 PRINTS Proline rich extensin signature 49 65 - -
Pvu9g0944 162 PRINTS Proline rich extensin signature 66 83 - -
Pvu9g0944 162 Pfam Hydrophobic seed protein 80 162 IPR027923 -
Pvu9g0944 162 CDD HPS_like 78 161 IPR027923 -
Pvu9g0944 162 Gene3D - 79 162 IPR036312 -
Pvu9g0944 162 PANTHER - 42 162 - -
Pvu9g0944 162 PANTHER - 1 30 - -
Pvu9g0944 162 SMART aai_6 80 161 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0944 Pvu-Chr9 14230258 14231050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0944 70 161 Acyl Lipid Metabolism Gene Families AT4G22490 41.489 4.57e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0944 - - gsj:114414965 149.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0944 9 14230258 14231050 Pvu9g0944 9 14230258 14231050 ECH
Pvu1g0514 1 5589718 5590597 Pvu9g0944 9 14230258 14231050 PCT