Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0514 ATGGCTTCCAACAAGCTTATTGCCACCATCTTTGTGCTTTCTCTCCTTGCCTCATCAACCAATGCATGTGGCACATGCACTCCCAAGGCTTCTCCCCCTCCTCCATCAGGGAAGTGCCCAAAGGACACATTAAAGCTAGGGGCTTGTGCAGACATTCTAGGACTTGTTAATATTGTTGTTGGCTCACCTGTCTCCAGCAAGTGTTGTGCATTGCTTTCGGGTTTGGCTGATCTAGAGGCTGCACTTTGCCTCTGCACTGCCATCAAGGCCAATGTGCTTGGAATCAACTTGAATGTGCCTATCACACTCAGTGTGCTACTCAGTGCTTGCCAAAAAACAGTTCCTTCTGGCTTCCAATGTCCATAG 366 0.4863 MASNKLIATIFVLSLLASSTNACGTCTPKASPPPPSGKCPKDTLKLGACADILGLVNIVVGSPVSSKCCALLSGLADLEAALCLCTAIKANVLGINLNVPITLSVLLSACQKTVPSGFQCP* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0514 121 Pfam Hydrophobic seed protein 39 121 IPR027923 -
Pvu1g0514 121 CDD HPS_like 37 120 IPR027923 -
Pvu1g0514 121 PANTHER - 22 121 - -
Pvu1g0514 121 Gene3D - 36 121 IPR036312 -
Pvu1g0514 121 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 42 121 IPR036312 -
Pvu1g0514 121 PANTHER LIPID TRANSFER PROTEIN 22 121 - -
Pvu1g0514 121 SMART aai_6 39 120 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0514 Pvu-Chr1 5589718 5590597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0514 37 121 Acyl Lipid Metabolism Gene Families AT4G22490 37.931 9.10e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0514 - - gmx:100306307 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0514 1 5589718 5590597 Pvu1g0514 1 5589718 5590597 ECH
Pvu1g0514 1 5589718 5590597 Pvu9g0944 9 14230258 14231050 PCT