Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0895 ATGATGCTTCGGTTCCTCGTGTCGCTTCTCGTGTTGGCGAGTTGCAAAATAGCGAAAGCAGAGACCACAGTAGCTTCAGCAAGAGCGTCTCTGGTTAGACAAGAAGACACCATCATATTTGCTTTGATTGAGAGATCCAGATTTCCTTTGAATTCCCCAACCTACAATCAGAACTACACTTCCGTTCAAGATTCAATTCTTGACTTCGTCGTTCACAACACTGAGGCCGTTCAATCCAAGGCAGGTAGATACACTAATCCTGAAGAAATTCCTTTCTCCACAAAAAGTTTACCACCCTCGGTTGTGCCACATTGCCCCTTCTCACAATTTTTGCATCCTGCAGCTGCTTCGATTAACATAAACAAGGACATTTGGAAACTGTACTTTAGTGATCTGCTTCCACTGTTTGTTGCTTCCGATGATGATGGCAACTATGCACAAACTGCTGCTGCCGATCTTACGTTGTTGCAGGCCATCTCCAGAAGGATTCATTATGGAAAATTTGTAGCTGAGGCCAAATTTAGAGAAAATCCTAAAGCCTTTGAGCCTTCAATTCGTGCCAAGGACAGGGAAACATTGTTGAAATTATTGACACTTAAGAAGGTTGAAGAGATGGTGGTGAAGAGGGTTGAAAAGAAGGCCATGGTGCTTGGGCAGGACGTGAACATTGACAATGATATAAAAAAGGGAGGAAAATACAAGGTTGATCCATCAATTGCTTCTATGTTGTACCAGAAATGGTTGATACCCCTCACAAAAAATGTTGAACTTGAATACTTACTGAAACGCTTCGAATGA 798 0.4236 MMLRFLVSLLVLASCKIAKAETTVASARASLVRQEDTIIFALIERSRFPLNSPTYNQNYTSVQDSILDFVVHNTEAVQSKAGRYTNPEEIPFSTKSLPPSVVPHCPFSQFLHPAAASININKDIWKLYFSDLLPLFVASDDDGNYAQTAAADLTLLQAISRRIHYGKFVAEAKFRENPKAFEPSIRAKDRETLLKLLTLKKVEEMVVKRVEKKAMVLGQDVNIDNDIKKGGKYKVDPSIASMLYQKWLIPLTKNVELEYLLKRFE* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0895 265 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Pvu9g0895 265 PANTHER CHORISMATE MUTASE 1 264 - -
Pvu9g0895 265 TIGRFAM CM_pl-yst: chorismate mutase 25 264 IPR008238 GO:0004106|GO:0009073
Pvu9g0895 265 ProSiteProfiles Chorismate mutase domain profile. 15 265 IPR008238 GO:0004106|GO:0009073
Pvu9g0895 265 SUPERFAMILY Chorismate mutase II 23 265 IPR036263 GO:0046417
Pvu9g0895 265 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 16 265 IPR037039 GO:0004106|GO:0009073
Pvu9g0895 265 PIRSF Chor_mut_AroQ_eu 15 265 IPR008238 GO:0004106|GO:0009073
Pvu9g0895 265 PANTHER CHORISMATE MUTASE 1 264 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0895 Pvu-Chr9 13623463 13627255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0895 K01850 - gmx:100779968 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0895 9 13623463 13627255 Pvu9g0895 9 13623463 13627255 ECH
Pvu1g0426 1 4261006 4264414 Pvu9g0895 9 13623463 13627255 PCT