Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0426 ATGCAACACCAACACATCACGTTCTTCTTTTTTTTATTCCCTTCACTGCTATTTATTAATCCCTTATACCCTTTATCTTCCTCTCTCTCATTTTTGTGTTATAGATTGCATAAACCTCAAAAGGAGTCTCTAATTACAATTCAATTCCAATCCCCACAACCCCACTTCATTTCCTGCACCTTAATTTCAAGAATGGCCAAAGCAGAAGAAAAAGTGTACACTCTGGCTTCGGTGAGGGAGAATTTGATTAGGCAAGAGGATACCATCATTTATGCTCTCATTGAGAGAGCCAAGTTTCCTTTCAATTCTCACACCTATGATGAGAAGTATGCTCAAATCCCTGGCTTTTCTGGCTCATTGTTTGAATTTGTTGTTAAAAATACAGAGGACATTCAAGCTAAGGCTGGAAGATACACAAACCCTGAAGAAAACCCCTTCTTCCCTGAAAATTTACCACCATCAAGTGTGCCATCTTACCCCTTCTCACAGTTTTTGCATCCTGGAGCTGCTTCAATTAACATAAACAAGTCCATCTTGAAAATGTATTTCAAAGATTTACTTCCATCTCTTGCTACTCCGGGTGATGATGGCAACTATGCGGAAACTGCTGCTGCTGATCTTTCATTAATGCAGGCTATCTCAAGAAGGATTCATTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATGCTCCTCAAGACTATGAGCCTTTAATTCGAGCCAAGGATAGCGAAGGTTTGATGAAATTGTTGACATTTCCTAGCGTTGAAGAGACAGTGACGAAGAGGGTTGAAAAGAAGGCCACAGTGTTTGGTCAGGAAGTAAGTCTTGACAGTGAAAATGATGGCATTGTAAAGACTAAATTAACTCCAACATTGGCTTCTGCTTTGTACAAAAATGGGGTGATACCTCTTACCAAGGACGTTCAGGTTGAGTACCTCAAGCGCCGTCTGAATGAAGGCATTTGA 969 0.4035 MQHQHITFFFFLFPSLLFINPLYPLSSSLSFLCYRLHKPQKESLITIQFQSPQPHFISCTLISRMAKAEEKVYTLASVRENLIRQEDTIIYALIERAKFPFNSHTYDEKYAQIPGFSGSLFEFVVKNTEDIQAKAGRYTNPEENPFFPENLPPSSVPSYPFSQFLHPGAASININKSILKMYFKDLLPSLATPGDDGNYAETAAADLSLMQAISRRIHYGKFVAEVKFRDAPQDYEPLIRAKDSEGLMKLLTFPSVEETVTKRVEKKATVFGQEVSLDSENDGIVKTKLTPTLASALYKNGVIPLTKDVQVEYLKRRLNEGI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0426 322 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 67 321 IPR037039 GO:0004106|GO:0009073
Pvu1g0426 322 SUPERFAMILY Chorismate mutase II 69 319 IPR036263 GO:0046417
Pvu1g0426 322 PANTHER CHORISMATE MUTASE 62 318 IPR008238 GO:0004106|GO:0009073
Pvu1g0426 322 PANTHER CHORISMATE MUTASE 62 318 - -
Pvu1g0426 322 TIGRFAM CM_pl-yst: chorismate mutase 74 319 IPR008238 GO:0004106|GO:0009073
Pvu1g0426 322 ProSiteProfiles Chorismate mutase domain profile. 66 319 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0426 Pvu-Chr1 4261006 4264414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0426 K01850 - gmx:100791341 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0426 1 4261006 4264414 Pvu1g0426 1 4261006 4264414 ECH
Pvu1g0426 1 4261006 4264414 Pvu9g0895 9 13623463 13627255 PCT