Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0892 ATGAAGTTCATGAAGTTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGAAACTGTATCAGGTATGTGTCATCTGAATTGGCTACAGATGTTACTGTTAATGTTGGTGATGTCACATTTCACCTTCACAAGTTCCCTCTACTGTCAAAGAGCAACCGACTACAAAAACTGGTATCAAAAGCTAATGAAGAGAACTCTGATGACATTTACTTGGATGATTTTCCTGGAGGACCAAAGGCCTTTGAAATATGTGCAAAATTCTGTTATGGGATAACTGTTACTCTTAATGCTTACAATGTTGTAGCTGCTCGTTGTGCTGCTGAGTATCTTGAGATGACTGAGGATGTTGATAGAGGAAACTTGGTTTTAAAGATTGAGGTGTTTCTTAACTCAAGTATCTTCCGTTGCTGGAAGGATTCTATTATTGTTCTCCAAACTTCTAAATCTCTTCTGCCATGGTCTGAGGATCTGAAGATCATTGGGAGATGCACAGACTCCATAGCTTCTAAAACTAGTGTGGACCCAGCGTACATCACTTGGTCTTACACTTATAATAGGAAATTATCTGAACCTGATAAAATTGTTGAGGACAAGATGACATTTTTAGAGAAAATTGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGACATATGTGAGCTGGACATTGATCTTTACAAACGAGTAATGGTTACTGTGAAATCTATGGGAAGAATGGATGGTGTTGTTATTGGAGAGGCACTACAAACCTATGCCTTTAGATGGATACCTGATTCTGTGGATACATTGGTTTATGGTGCCAATGCCTCAAGGACTAAATCTGTGGTAGAAACAATTGTCTGTTTATTGCCATATGATAATAGCATTGGTTGTTCGTGTAGTTTCTTACTGAAGCTATTGAGAGTGGCCATATTAGTCTGTGCAAATGAGTCATCAAAAAAGGAATTGATGAAGAGCATTAGCCTCAAATTGCATGAAGCTTGTGTCAAAGATTTATTGATTCCCGCAAGATCTCCCCAGACTACTACATATGATGTTCATTTGGTACAAGGTCTTTTGAATCAATACATGAATGACGAAAAGGGAAGATGTGGTATGGATGTTGTTGAGGATAAACATGGAGAAGATGAATATATTTTAGCACGAAGGTCTTTATTGAATGTTGGCAAGTTGGTGGATGGTTATCTTGGAGAAATTGCACATGATCCTAATCTTGGCCTCTCTAGTTTTGCTGATTTGTCACAATCCATTCCAGATTTTGCTAGACCAGATCATGATGGTCTATACAGAGCTATAGACACCTACTTAAAGGAGCATCCAGAATTGACTAAAGCCGAAAGGAAGAAACTATGTGGGCTGATGGATGTCCGGAAATTGACAGCGGAGGCTTCCATGCATGCTGCACAGAATGAATGCCTTCCCCTTCGAGTTGTAGTCCAAGTTCTCTTCTTTGATCAGGTAAGGTCTTCTATCAGCTTTCAACCACTCGGCCACAACAGCATGTATGACCCTTCACGCTCTCCAATGAATCGAGATGAGGGGTGTAAGAAAACAATGGGAGATAACTGCCAACCCCTCAAGAACCAGATGAGCCATTTGAGGATCAAGGATGAAGAGTTGCATAAAAATGGGAAATTAGGTAAGAAGAATAGCAAAAACAGCAAAAGTGGCCTTCAGTTGCTGCCATCAAGATCAAGGAGAATTTTTGACAAGTTATGGAGTCTGAGAAAGGTACAAGGAGAGAATAGGAGCTCGGAGACTTCAGGGAGTTCTAGTAGCCCAACTTCATTAGGCCATGGTGATACCAAATCATATGGTCTATCTTTGAGACACCAGAGGCATTCCATCTCTTAG 1851 0.4041 MKFMKLGSKPDALQADGNCIRYVSSELATDVTVNVGDVTFHLHKFPLLSKSNRLQKLVSKANEENSDDIYLDDFPGGPKAFEICAKFCYGITVTLNAYNVVAARCAAEYLEMTEDVDRGNLVLKIEVFLNSSIFRCWKDSIIVLQTSKSLLPWSEDLKIIGRCTDSIASKTSVDPAYITWSYTYNRKLSEPDKIVEDKMTFLEKIESVPKDWWVEDICELDIDLYKRVMVTVKSMGRMDGVVIGEALQTYAFRWIPDSVDTLVYGANASRTKSVVETIVCLLPYDNSIGCSCSFLLKLLRVAILVCANESSKKELMKSISLKLHEACVKDLLIPARSPQTTTYDVHLVQGLLNQYMNDEKGRCGMDVVEDKHGEDEYILARRSLLNVGKLVDGYLGEIAHDPNLGLSSFADLSQSIPDFARPDHDGLYRAIDTYLKEHPELTKAERKKLCGLMDVRKLTAEASMHAAQNECLPLRVVVQVLFFDQVRSSISFQPLGHNSMYDPSRSPMNRDEGCKKTMGDNCQPLKNQMSHLRIKDEELHKNGKLGKKNSKNSKSGLQLLPSRSRRIFDKLWSLRKVQGENRSSETSGSSSSPTSLGHGDTKSYGLSLRHQRHSIS* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0892 616 MobiDBLite consensus disorder prediction 497 527 - -
Pvu9g0892 616 Pfam NPH3 family 211 463 IPR027356 -
Pvu9g0892 616 MobiDBLite consensus disorder prediction 578 601 - -
Pvu9g0892 616 SUPERFAMILY POZ domain 22 116 IPR011333 -
Pvu9g0892 616 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Pvu9g0892 616 PANTHER OS12G0117600 PROTEIN 4 601 IPR043454 -
Pvu9g0892 616 SMART BTB_4 29 127 IPR000210 GO:0005515
Pvu9g0892 616 Pfam BTB/POZ domain 25 115 IPR000210 GO:0005515
Pvu9g0892 616 CDD BTB_POZ_NPY3-like 21 124 - -
Pvu9g0892 616 ProSiteProfiles NPH3 domain profile. 211 487 IPR027356 -
Pvu9g0892 616 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 601 IPR029961 GO:0060918|GO:0099402
Pvu9g0892 616 MobiDBLite consensus disorder prediction 578 616 - -
Pvu9g0892 616 Gene3D Potassium Channel Kv1.1; Chain A 9 125 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0892 Pvu-Chr9 13599735 13604103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0892 22 486 EF-hand Containing Proteins AT3G44820 33.733 5.12e-88 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0892 - - gmx:100784205 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0424 1 4242329 4247269 Pvu9g0892 9 13599735 13604103 PCT