Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0424 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGTTCTTCAAGCTGACGGAAAATCTATCAGGTATATATCATCTGAATTGGCTACAGATATTATCATAACTGTTGGTGAAGTGAAGTTTCACCTGCACAAGTTCCCTCTATTGTCCAAGAGTAATCGTTTACAAAAGTTGCTGGCAAGGGCTAATGAAGAGTATTCTGATGAAGTTCAATTGGATGATTTTCCTGGTGGTTCCAAGGCCTTCGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTCGTTGTGGAGCTGAGTACCTTGAAATGACTGAGGATATTGAGAAAGGGAACTTAGTTTTTAAAATTGAGGTGTTTCTTACCTCCAGTATATTTCGTAGTTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTCTGCCATGGTCTGAGGACCTAAAGATAGTTGGGAGATGCATAGATTCCATAGCATCTAAAACTTCTGTGGACCCAGCAAACATCACTTGGTCTTATACTTATAACCGGAAATTATCAGAACTTGATAAAATTGTTGAGGACAAGACAGCACCACAAGACAAAATTGAGCCTGTTCCCAAGGATTGGTGGGTTGAAGATATATGTGAGCTGGACATTGAGCTGTATAAACGGGTTATGATTACAGTCAAATCGAAGGGAAGAATGGATGGAGTTGTGATTGGTGAGGCACTAAAAATGTATGCTGTAAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCCGATGCGCATGCCCGGAGGAACAAATCTCTTGTAGAAACAATTGTCTGTTTGTTGCCATGTGATAATGGCATGGGTTGTTCATGTAGTTTCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTAGAAGCTGATGAGTCTTCAAGGGGACAATTGATGAAGAACATTGGCCTAAAATTGCATGAAGCTTCTGTCAAAGATTTACTGTTTCCAGCAAGGCTTCCTCAGATCACCAAATTTGATTTTGATCTGGTGCAAAATCTTTTGAACCTATACATGACTAACGTAAGGGGAAGCCGTGATATGGAGATCGAAGAGAAGAAAGATAAAGCAAACGAGTATGAGTCTATTTTAGGCCAGAGGTCTTTATTGAACGTTGGCAAGTTGGTAGATGGCTATCTGGGAGAGATTGCACATGATCCAAATCTCAGCCTCTCTAATTTTGTTAATTTGTCACAGTCAATTCCAGACTTTGCTAGACCAAATCATGATGGTCTGTACAGAGCTATAGACATCTACTTGAAGGAGCACCCAGGTTTGACAAAAGCTGAAAGGAAGAAGATATGTGGACTAATGGATGTCAAGAAATTGACAGTGGATGCATCCATGCATGCTGCACAGAATGAACGCCTTCCCCTTAGAGTGGTTGTGCAGGTTCTCTATTTCGAGCAGATCAGAGCCGCCTCGAATGGCCGGACACACGGTAACAGTCCACGCGACTCCTCAAGCACTCTTGTGAATGGCAATGAGGAGTGTGTGAAAACTGGGGGAGAGAGCTGCCATTCCCTCAACACCCAGATGTGTCACTTGAAGATCAGAGACGAGGAGTTTCACAAGAATGGGAAACTGAACAAGAAGAGTAGCAAAAACAGCAGAAGTGGCATGCAGTTGCTGCCATCTAGATCAAGGAGAATCTTTGATAAGTTGTGGATTGTTGGAAAAGGGCAAGGAGAAAATAGGAGTTCAGAGACTTCAGGGAGTTCTAATAGTCCAACTTCTGTTGTCCCTGGAGACACCAAATCATCTGGTTCATCATTGAGACACAGGAGGCATTCTATCTCTTAG 1854 0.418 MKFMKLGSKPDVLQADGKSIRYISSELATDIIITVGEVKFHLHKFPLLSKSNRLQKLLARANEEYSDEVQLDDFPGGSKAFEICAKFCYGMTVTLNAYNVVAARCGAEYLEMTEDIEKGNLVFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKIVGRCIDSIASKTSVDPANITWSYTYNRKLSELDKIVEDKTAPQDKIEPVPKDWWVEDICELDIELYKRVMITVKSKGRMDGVVIGEALKMYAVRWLPDSVDALVSDAHARRNKSLVETIVCLLPCDNGMGCSCSFLLKLLKVAILVEADESSRGQLMKNIGLKLHEASVKDLLFPARLPQITKFDFDLVQNLLNLYMTNVRGSRDMEIEEKKDKANEYESILGQRSLLNVGKLVDGYLGEIAHDPNLSLSNFVNLSQSIPDFARPNHDGLYRAIDIYLKEHPGLTKAERKKICGLMDVKKLTVDASMHAAQNERLPLRVVVQVLYFEQIRAASNGRTHGNSPRDSSSTLVNGNEECVKTGGESCHSLNTQMCHLKIRDEEFHKNGKLNKKSSKNSRSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPGDTKSSGSSLRHRRHSIS* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0424 617 Gene3D Potassium Channel Kv1.1; Chain A 13 121 IPR011333 -
Pvu1g0424 617 MobiDBLite consensus disorder prediction 493 513 - -
Pvu1g0424 617 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Pvu1g0424 617 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 605 IPR029961 GO:0060918|GO:0099402
Pvu1g0424 617 MobiDBLite consensus disorder prediction 542 561 - -
Pvu1g0424 617 MobiDBLite consensus disorder prediction 578 617 - -
Pvu1g0424 617 CDD BTB_POZ_NPY3-like 21 124 - -
Pvu1g0424 617 Pfam NPH3 family 211 465 IPR027356 -
Pvu1g0424 617 MobiDBLite consensus disorder prediction 580 605 - -
Pvu1g0424 617 ProSiteProfiles NPH3 domain profile. 211 489 IPR027356 -
Pvu1g0424 617 Pfam BTB/POZ domain 26 116 IPR000210 GO:0005515
Pvu1g0424 617 SUPERFAMILY POZ domain 23 114 IPR011333 -
Pvu1g0424 617 PANTHER OS12G0117600 PROTEIN 4 605 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0424 Pvu-Chr1 4242329 4247269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0424 22 520 EF-hand Containing Proteins AT3G44820 32.203 7.79e-90 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0424 - - gmx:100809437 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0424 1 4242329 4247269 Pvu1g0424 1 4242329 4247269 ECH
Pvu1g0424 1 4242329 4247269 Pvu9g0892 9 13599735 13604103 PCT