Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0809 ATGGAGGAAGGGTACCCCAGAAGCAAGTTCAAGACCGTGTGTGTCTTCTGTGGTAGCAACTCCGGCAACCGACAAATCTTCAGCGACGCTGCGATTCAATTGGGCAATGAACTGATAAAGAGGAACTTAGGCTTGGTGTATGGTGGGGGCAGTGTTGGGCTGATGGGCTTAATATCTCAGAGAGTGTATGATGGAGGCTGCCATGTCCTGGGGATCATTCCAAAAGCTCTCATGCCTCTCGAGATATCTGGTGAAACAGTAGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATACGGAACCATGGAAGAGCTGTTGGAGATGATAACCTGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGATACTATAACTGTTTGCTTGCATTATTTGACAACGGTGTTAAAGAAGGCTTCATTAAGCCTTGTGCACGGAATATTGTTGTCTCTGCCACTTCTGCCAAAGAACTTATGATGAAGATGGAGCATTACACTCCTTCTCACGAGCATGCTGCCCCTCATGAGAGCTGGCAGACGAAGAAGCAATTAGGTAATTATCCAGATGCAGAGTGA 645 0.4636 MEEGYPRSKFKTVCVFCGSNSGNRQIFSDAAIQLGNELIKRNLGLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPCARNIVVSATSAKELMMKMEHYTPSHEHAAPHESWQTKKQLGNYPDAE* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0809 214 SUPERFAMILY MCP/YpsA-like 9 188 - -
Pvu9g0809 214 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Pvu9g0809 214 PANTHER LOG FAMILY PROTEIN YJL055W 8 207 - -
Pvu9g0809 214 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Pvu9g0809 214 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 207 - -
Pvu9g0809 214 MobiDBLite consensus disorder prediction 192 214 - -
Pvu9g0809 214 Gene3D - 9 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0809 Pvu-Chr9 12794282 12797245 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0809 K22522 - gmx:100785484 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0380 1 3601073 3604290 Pvu9g0809 9 12794282 12797245 PCT