Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0380 ATGGAACAAGGTTTCCCCAAAAACATGTTCAAGAAGCTATGTGTCTTCTGCGGCAGCAACGCTGGTAACCGCCAAGTTTTCAGTGACGCCACCATTGAATTGGCCACTGAACTGGTTAAGAGGAACATTGACTTGGTGTATGGTGGGGGAAGTATTGGGCTGATGGGCTTAATATCCCAGAGAATGTATGATGGAGGCTGCCATGTTCTTGGCGTTATTCCAAAAGCTCTCATGCCTCATGAGATATCAGGTGAACCAGTTGGTGAAGTGAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTGAAGAAGCTGATGCATTTATCGCTCTACCTGGAGGATATGGAACAATGGAAGAGCTGTTGGAGATGATAACTTGGGCTCAACTTGGAATACATAAAAAACCGGTTGGTCTACTGAATGTTGATGGTTACTACAACTCGTTGCTTGCATTGTTTGACAATGGTGTTAAAGAAGGCTTCATTAAGCGTGGTGCTCGGGATATACTTGTTGCGGCTTCATCAGCCAAAGAACTTATGATGAAAATGGAGCAATATTCTCCTTCCCATGAACATGTAGCCCCTCATGATAGCTGGAAGGCAAGGCAATTGGGTAATTATGCAGGACAGAAGAATACAGAATGA 651 0.4409 MEQGFPKNMFKKLCVFCGSNAGNRQVFSDATIELATELVKRNIDLVYGGGSIGLMGLISQRMYDGGCHVLGVIPKALMPHEISGEPVGEVRIVSDMHERKAAMAEEADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNSLLALFDNGVKEGFIKRGARDILVAASSAKELMMKMEQYSPSHEHVAPHDSWKARQLGNYAGQKNTE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0380 216 Gene3D - 10 204 - -
Pvu1g0380 216 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG4-RELATED 7 206 - -
Pvu1g0380 216 SUPERFAMILY MCP/YpsA-like 8 188 - -
Pvu1g0380 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Pvu1g0380 216 PANTHER LOG FAMILY PROTEIN YJL055W 7 206 - -
Pvu1g0380 216 TIGRFAM TIGR00730: TIGR00730 family protein 12 188 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0380 Pvu-Chr1 3601073 3604290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0380 K22522 - gmx:100819765 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0380 1 3601073 3604290 Pvu9g0809 9 12794282 12797245 PCT