Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0790 ATGGCTCTTCTCACTCGAGCCTCCTCACGCTTCCATCAACTGCACTCCCATCAACGGGCACTCTCCCTCCACACAACGCTCCCAACTCTCAACGCATCCACATCCACACCCACGCCCACGCCATATGCTCCGCCACCGCCTCCCTCCGCTTCCTCTCCCGTCGGCGTCTCCAAGTCGGCGGAGTTCGTCATCTCCAAGGTCGACGATCTCATGAACTGGGCCCGCCGCGGCTCCATCTGGCCCATGACCTTCGGCCTTGCCTGCTGCGCCGTCGAAATGATGCACACCGGCGCCGCCCGCTATGATCTCGATCGCTTCGGCATCATTTTCAGGCCCAGCCCTCGCCAGTCTGACTGCATGATCGTCGCAGGCACTCTCACCAACAAGATGGCTCCCGCTCTTCGAAAGGTTTATGACCAGATGCCTGAACCTAGATGGGTCATTTCAATGGGAAGTTGTGCTAACGGCGGAGGTTACTACCACTACTCTTACTCCGTGGTTCGAGGATGTGACAGGATTGTTCCCGTTGACATATATATTCCAGGCTGTCCTCCAACTGCTGAGGCTTTGTTGTATGGACTCCTCCAGCTGCAGAAAAAGATCAGTAGGCGCAAAGACTTCCTCCATTGGTGGACAAAGTGA 642 0.567 MALLTRASSRFHQLHSHQRALSLHTTLPTLNASTSTPTPTPYAPPPPPSASSPVGVSKSAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGLLQLQKKISRRKDFLHWWTK* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0790 213 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 169 185 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pvu9g0790 213 PANTHER NADH DEHYDROGENASE 1 213 - -
Pvu9g0790 213 SUPERFAMILY HydA/Nqo6-like 61 205 - -
Pvu9g0790 213 Gene3D - 59 213 - -
Pvu9g0790 213 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 59 202 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pvu9g0790 213 MobiDBLite consensus disorder prediction 29 55 - -
Pvu9g0790 213 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 88 197 IPR006137 GO:0051536
Pvu9g0790 213 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL 1 213 - -
Pvu9g0790 213 TIGRFAM nuoB_fam: NADH-quinone oxidoreductase, B subunit 62 203 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pvu9g0790 213 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0790 Pvu-Chr9 12595533 12599613 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0790 K03940 - gmx:100802267 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0790 9 12595533 12599613 Pvu9g0790 9 12595533 12599613 ECH
Pvu1g0345 1 3290899 3292819 Pvu9g0790 9 12595533 12599613 PCT