Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0423 ATGGATTCGGATCGATTCACTACTTGCCCCTTCTGCGATTCATGTCTACCCTTGTCTCAACTCACTGAGCACGCCAATTTTCATTTTTGGGAACTCCAGCATGATTTTGACCTGCCCCCAATAATTCATCGCTCTCCCGATGCCACTGCACCCCCTCAATCTCTTCCGAGAGAGCAAGCTGCCTATGTTTCACTGTCTGGAGCAAAGTATTGGCGTGGTGGTGAGACTAGTAGCGATAATGGGGAGTGCAAAGCGAATGACAAAATCTCTTGCTTGATTGTTTCTCAGACAAGGAGTGAATTTTACAAAGTTGAAGCGGGTTTGATGGCATTGTTGAAAAATTGTTTAGAGTCTGAAATTGGAAATTCAATTAGCATTTTGTCGGGTTATGTTGATCATTTTGAGTGCCTTGAATCTGAGGATGCAGGATGGGGTTGTGGGTGGCGTAACATTCAAATGCTTAGTTCTCATTTGCTAGTGCAAAGACCTGAAGCAAGGAAAGCTTTGTTTGGTGGTTCGGGATTTGTTCCTGATATCTTGTCGCTGCAAAGGTGGCTCGAGATTGCTTGGGAGAAGGGTTTTGATCTGCCTGGATCAGCTCAATTCAATCATGTTATTTTTGGTTCTAAAAAATGGATAGGAACTACTGAGTGTGCAGCTCTGTTGCGTTCCTTTGCTCTTCGGGCAAGAGTAGTGGATTTTGGTCCTAAGGAATCCCAATCCATTCCAGGTTCAAGCGCTGACAATGCCAGAAATGAAACAAGTATTCCTAATTTGGTAAAAGAGAAAGATAAAGAGGGCAGGGGTTATCACGTTCTCATGGATTTTGTGTGGAATTACTTTTTGGATAAAATCTCAATCCAATTTGGCCAGAAGCATGTTGTGATCAGTGAGAAAACGCCTTTATACTTTCAGCATGACGGTCACTCAAGAACAATAGTTGGAATTCAAGTCAACCATCAACAAAAAAGACATCTGCAATATAATCTCCTCGTTTTGGACCCTGCTCAGAGTACAGCCGCTCTTGAAAGATCCCTCAGGCAGAAAGTTGGGTGGGAGGAACTCATAAAAAGGGGAATGCATACACTGAAGAAGCCACAGTACCAGTTGTGTTATGTTGATCCTGGAATCGCTAGTGAGGGGGAGGTGGAAAAACTGAAAACAATTGATAGCATCTTCCTTGAATTTTAA 1191 0.4299 MDSDRFTTCPFCDSCLPLSQLTEHANFHFWELQHDFDLPPIIHRSPDATAPPQSLPREQAAYVSLSGAKYWRGGETSSDNGECKANDKISCLIVSQTRSEFYKVEAGLMALLKNCLESEIGNSISILSGYVDHFECLESEDAGWGCGWRNIQMLSSHLLVQRPEARKALFGGSGFVPDILSLQRWLEIAWEKGFDLPGSAQFNHVIFGSKKWIGTTECAALLRSFALRARVVDFGPKESQSIPGSSADNARNETSIPNLVKEKDKEGRGYHVLMDFVWNYFLDKISIQFGQKHVVISEKTPLYFQHDGHSRTIVGIQVNHQQKRHLQYNLLVLDPAQSTAALERSLRQKVGWEELIKRGMHTLKKPQYQLCYVDPGIASEGEVEKLKTIDSIFLEF* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0423 396 Pfam Peptidase family C78 124 371 IPR012462 -
Pvu9g0423 396 Gene3D - 111 376 - -
Pvu9g0423 396 PANTHER ZINC FINGER PROTEIN 1 396 - -
Pvu9g0423 396 PANTHER PEPTIDASE C78, UBIQUITIN MODIFIER-SPECIFIC PEPTIDASE 1/ 2-RELATED 1 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0423 Pvu-Chr9 8142343 8147482 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0423 K24134 - gmx:100781936 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0423 9 8142343 8147482 Pvu9g0423 9 8142343 8147482 ECH
Pvu8g1945 8 49154592 49159224 Pvu9g0423 9 8142343 8147482 PCT