Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1945 ATGAACATGGATTCATCCACTTGCCCCTTCTGTCATTTATCTGTTCCTTCCTCTGAACTCCAATGGCACGCCAACTCCCATTTCGACGACGACGAGGCCAATTATCATTCTCCTTCGGCTAGTGATTTGCATTTTGATGGTGGTGGAGAAGTGAGGGGTAGAGATGTGGTGTCGAAAATGGATGAAAATATCTCTTGCTTAGTTGATTGGCAAAGAAGGGGAGAGTTTCACAAGGTTGAAAGAGGTTTGATGGCCTTGTTGAGAGACTGTTTGGAGTCTGAGGCTGAAAATTCAAGAAGCATTTTGACATGTTATGTTGATCATTTCCAGAGCCTTGAGTTTCAGGATGTTGGATGGGGTTGTGGTTGGCGTAACATTCAAATGCTTAGCTCTCACTTAATGACACAAAGGCCAGAAGCAAAAGAAACTATGTTTGGCCTTTCAGGGTTTGTTCCTGACATCCCATCACTCCAGAGGTGGCTTGAGATTGCTTGGGAAAGGGGTTTTGATGCAGCTGGCGCTGATCAGTTTAACCATGCTGTCTATGGCTCAAAAAAATGGATTGGAGCTACTGAATGTGCTGCTCTTTTGCGTTCTTTTGGTCTCCGGGCTAGGGTAGTGGATTTTGGTCCTAAGGAATCTGAGAAACTCTATCTATCTGTCCCTGGTTCAAGTGTTGTAAAGGAGCCTGTGAAAAGTAATGATGGAAGGAAGAGGAAAGCACCAAATACTTATGGACCAATGGATAGATACGTGTCTCGTGGTGTTGCTCAAACAAGTTGCAGCCAAGATGCAAAGTCATGTCCTTCTCTTGTCCGGATTGGTGACACCGTGGATAAAGAAAGTAGTGGTAATAGAGAACTATACAGTACTGAGAAACTGAACGAGGGTCACCAAGTTCTTATGGACTTTGTGTGGAATTACTTCTCTCATAAAAACACAGTTCAATTTGATCATAAACATGTTCATATCAGTGAGAAAACGCCACTGTACTTTCAGCACGATGGACATTCAAGAACAATAGTTGGAATTCAAGTCAAACATCAACGGTCTGGAATTCCACAATACAATCTCCTGGTTCTGGATCCCAGTCATAGAACGGGTGCACTAGAAAGATCTCTTACGGAGAAAGTTGGATGGCAGAAACTCTTAAAAAGAGGAGTGCACACACTAAAGAAACAACAATACCAGTTGTGTTATGTTGATCCTGGAATTGCCAGTGAGGAGGAGATGGAGAAACTCAAGACTATTGATAGTGTCTTCCTTGAATTTTAA 1275 0.4275 MNMDSSTCPFCHLSVPSSELQWHANSHFDDDEANYHSPSASDLHFDGGGEVRGRDVVSKMDENISCLVDWQRRGEFHKVERGLMALLRDCLESEAENSRSILTCYVDHFQSLEFQDVGWGCGWRNIQMLSSHLMTQRPEAKETMFGLSGFVPDIPSLQRWLEIAWERGFDAAGADQFNHAVYGSKKWIGATECAALLRSFGLRARVVDFGPKESEKLYLSVPGSSVVKEPVKSNDGRKRKAPNTYGPMDRYVSRGVAQTSCSQDAKSCPSLVRIGDTVDKESSGNRELYSTEKLNEGHQVLMDFVWNYFSHKNTVQFDHKHVHISEKTPLYFQHDGHSRTIVGIQVKHQRSGIPQYNLLVLDPSHRTGALERSLTEKVGWQKLLKRGVHTLKKQQYQLCYVDPGIASEEEMEKLKTIDSVFLEF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1945 424 Pfam Peptidase family C78 99 399 IPR012462 -
Pvu8g1945 424 PANTHER ZINC FINGER PROTEIN 273 424 - -
Pvu8g1945 424 PANTHER ZINC FINGER PROTEIN 1 234 - -
Pvu8g1945 424 MobiDBLite consensus disorder prediction 229 249 - -
Pvu8g1945 424 PANTHER PEPTIDASE C78, UBIQUITIN MODIFIER-SPECIFIC PEPTIDASE 1/ 2-RELATED 273 424 - -
Pvu8g1945 424 PANTHER PEPTIDASE C78, UBIQUITIN MODIFIER-SPECIFIC PEPTIDASE 1/ 2-RELATED 1 234 - -
Pvu8g1945 424 Gene3D - 87 238 - -
Pvu8g1945 424 Gene3D - 287 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1945 Pvu-Chr8 49154592 49159224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1945 K24134 - gmx:100789113 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1945 8 49154592 49159224 Pvu9g0423 9 8142343 8147482 PCT