Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0408 AAGGAGTTACACTTCAATGACTTTGGAGATCGTGTAGCTCAGTTGTTACATGTTGAATTAGCTTCTCCGTTTACACAATGGCGAAACAGTAATATTAGGCAGGAAATTTTGATTGTTAACACTCACCTGCTATTTCCCCACGATTCAACTCTATCCCTTGTACGACTGCAGCAGGTTTACAAGATTCTTCAATACGTAGAATCTTATCAGAATGATTTTCAACTCAAGCCAATGCCAATCATGCTCTGCGGTGACTGGAATGGAAGCAAACGTGGACATGTCTACAAGTTCCTGAGGTCTCAGGGCTTTGTATCTTCTTATGATACTGCACATCATTACACTGATGCAGATGCAGACAAGTGGGTTAGCCACCGCAATCATAGGGGAAATATATGTGCTGTTGATTTTATTTGGCTCCTAAATCCTGACAAATATCGAAAACTACTAAAAGCAAGTTGGAGTGAAGCAGTCTTTGGTATGTTCAAGTATCTGGTACGGAGAGCTTCATTGACTGAGAGTGATGCATTTGCCTTTCTAAAGGCTGATAATGAAGATTGTATTACCTATTCAGGTTTCTGTGAAGCACTTACACAGCTCAGTTTAACTGGGCATTGCCATGGATTAAATGACGAAGAGATAAAGGACTTGTGGCTCCAGGCAGCTGTAGATGGAAATGGTGTTCTTGATTATAAAGAATTCCTGCAAATCTGGAATTCAACAGCTCCAGATCAGAGTGATGACAGCAAAAATGGGGAACAGGATGACGGTGTAAATGATTCACAGGATCAAACAATTGGTTTCAGTGTAAAAAATGCAGTTCTGTTTCCTCCAGAGGTGGAGAAAGGTAGATGGCCTGAAGACTACTCCCTTTCTGATCATGCACGGCTCACTGTAGTGTTCTCGCCAATAAGAATGCCATGCTCCCAGTTGATTTGCTAA 939 0.4143 KELHFNDFGDRVAQLLHVELASPFTQWRNSNIRQEILIVNTHLLFPHDSTLSLVRLQQVYKILQYVESYQNDFQLKPMPIMLCGDWNGSKRGHVYKFLRSQGFVSSYDTAHHYTDADADKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFGMFKYLVRRASLTESDAFAFLKADNEDCITYSGFCEALTQLSLTGHCHGLNDEEIKDLWLQAAVDGNGVLDYKEFLQIWNSTAPDQSDDSKNGEQDDGVNDSQDQTIGFSVKNAVLFPPEVEKGRWPEDYSLSDHARLTVVFSPIRMPCSQLIC* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0408 312 MobiDBLite consensus disorder prediction 241 262 - -
Pvu9g0408 312 ProSiteProfiles EF-hand calcium-binding domain profile. 208 243 IPR002048 GO:0005509
Pvu9g0408 312 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 1 308 - -
Pvu9g0408 312 Gene3D - 168 263 - -
Pvu9g0408 312 Gene3D Endonuclease/exonuclease/phosphatase 1 161 IPR036691 -
Pvu9g0408 312 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 308 - -
Pvu9g0408 312 SUPERFAMILY DNase I-like 8 142 IPR036691 -
Pvu9g0408 312 SUPERFAMILY EF-hand 124 240 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0408 Pvu-Chr9 8026834 8029199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0408 1 308 EF-hand Containing Proteins AT1G02270 60.841 6.60e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0408 - - pvu:PHAVU_009G039100g 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0408 9 8026834 8029199 Pvu9g0408 9 8026834 8029199 ECH
Pvu8g1957 8 49311195 49315269 Pvu9g0408 9 8026834 8029199 PCT