Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1957 ATGGGAAGAATTTCAAGGACCAGAAGTTGCGCAATTGCCTCTTCAATGCAAGATAACCAACACCAACCACCTTGCATTACCTGCACCACTTTTAACATTCTTGCACCAATATACAAGCGTCTCAACCATGAGGATCAGAATTGCCGTGAAAGTGACTACAGAGCGTGTTGGTTGGCCAGGAATCAGAGGATATTGGATTGGTTGTTGTATGAGAGATCTTCTATTATCTGTCTTCAGGAATTTTGGATTGGAAACGAAGAGCTTGTTGATGTGTATGACAAGAGACTTGGTGATGCTGGTTATATTAATTTCAAGCTTGCAAGGACTAACAATCGTGGTGATGGTCTTCTGATAGCAGTGCAAAAGGATTATTTCACAGTTGTTAACTATAAGGAGCTGCACTTTAATGACTGTAGTGATCGAGTAGCTCAACTGTTACACGTTGAGTTAGCTTCTTCCTTATCACAATGTCAAAACAGTGATGTTAGGCACGAAATTCTCATTGTCAACACTCACCTACTGTTTCCTCATGATTCGAGTCTTTGCCTTGTACGACTGCATCAAGTCTACAAGATACTTCAATATCTCGAATCTTATCAGAATGAGCACCAACTTAAGCCTTTGCCAATCCTATTATGCGGTGACTGGAATGGAAGCAAAAGAGGACATGTTTACAAGTTCCTAAGGTCTCAGGGGTTTGTATCATCATATGATGCTGCACATCAATACACTGATGCTGATGCTCACAAGTGGGTTAGCCACCACAATCATCTCGGAAACACATGTGGTGTGGATTTTATATGGCTTCTTAACCCTGACAAATATCAAAAACTACTTAAAACAAGTTGGAGCGAAGCACTGTTTAGCATGTTTAAGTATCTAGTGCAAAAAGATTCACTGACAGAGAGAGATGCATTTGCTTTTCTAAAGGTTGACAATGAAGATTGTATTACCTATTCTGGTTTCTGTGCAGCACTTAGACAGCTTAATTTAATTGGTCATTGTCATGGGTTAAGTGTTGAAGAGACAAAGGACTTGTGGATTCAAGCAGATATAAATGGAAATGGTGTTATTGATTATAAAGGATTTCTGCAGCAAATCTGGAATCCAACAGGATCAGATGAAAGAGATGACAAGAATGGGCAACATGATGATGAGGCAAATGATAGTGAGAAGGAGCAAACGATTGGTTTTAATGTAAAAAATGCAGTTCTTTTCCCTCCAGAGGTAGAAAAAGGTAGATGGCCTGAAGACTACTCTCTCTCTGATCATGCAACACTCACTGTAGTGCTCTCACCTATAAGAATGCTATGCCACACTCCAAAATAA 1329 0.3973 MGRISRTRSCAIASSMQDNQHQPPCITCTTFNILAPIYKRLNHEDQNCRESDYRACWLARNQRILDWLLYERSSIICLQEFWIGNEELVDVYDKRLGDAGYINFKLARTNNRGDGLLIAVQKDYFTVVNYKELHFNDCSDRVAQLLHVELASSLSQCQNSDVRHEILIVNTHLLFPHDSSLCLVRLHQVYKILQYLESYQNEHQLKPLPILLCGDWNGSKRGHVYKFLRSQGFVSSYDAAHQYTDADAHKWVSHHNHLGNTCGVDFIWLLNPDKYQKLLKTSWSEALFSMFKYLVQKDSLTERDAFAFLKVDNEDCITYSGFCAALRQLNLIGHCHGLSVEETKDLWIQADINGNGVIDYKGFLQQIWNPTGSDERDDKNGQHDDEANDSEKEQTIGFNVKNAVLFPPEVEKGRWPEDYSLSDHATLTVVLSPIRMLCHTPK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1957 442 SUPERFAMILY EF-hand 282 366 IPR011992 -
Pvu8g1957 442 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 1 439 - -
Pvu8g1957 442 Gene3D Endonuclease/exonuclease/phosphatase 5 435 IPR036691 -
Pvu8g1957 442 MobiDBLite consensus disorder prediction 371 392 - -
Pvu8g1957 442 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 439 - -
Pvu8g1957 442 Pfam Endonuclease/Exonuclease/phosphatase family 30 240 IPR005135 GO:0003824
Pvu8g1957 442 SUPERFAMILY DNase I-like 19 241 IPR036691 -
Pvu8g1957 442 MobiDBLite consensus disorder prediction 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1957 Pvu-Chr8 49311195 49315269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1957 2 332 EF-hand Containing Proteins AT5G54130 73.193 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1957 - - vra:106764935 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1957 8 49311195 49315269 Pvu9g0408 9 8026834 8029199 PCT