Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0405 ATGGGTGAGGAAGCAAAACAAGAATTAGCTGCAGAGGAAAATTCAGCAGAAGAGAAACAAGAGAAAGAGTCTAAACCACCATCTCCGTGTGTGTTGTTTGTTGACTTACACTGTATAGGATGCGCCAAGAAAATTAAAAAATCTATTATGAAGATGAGAGGAGTTGAGGGAGTGGTGATTGATATGGCTAAAAATCAAGTGACCATAAGGGGAAGAGTGGAGCCTGAAGCAATATGTAACATGATTACGAAGAAAACAAAGAAAAGAGCCCAAGTTATACCTCCATTGCCAGAACCTGAAGGAGAATCTATACCAGAAGTTGTCACTTCTCAGGCTAGTGAAGCAGTCACTGTGGAACTTAAGATAAGCATGCATTGTGAGGCCTGTGCTGAGCAGCTCAAACGGAAGATACTCAAATTGAGAGGAGTTCAAACAGCAGTGGCAGAGCTTAGCACAGGGAAGGTTATTGTGACGGGGACCATGGATGCAAACAGGCTAGTGGACTATGTTCATAGACGCACCAAAAAACAGGTCAAAATAGTTCCCAAGCCAGAACCTGAACCAGGACCAAAGAAAGAAGAAAATAAAGAATCAGAGAAGCCTGGAGCTGAAGAGGTGAAACCTGAGGAAGAGAAGGAAGAAAAGGAGGAGAAAGAAGAGGAGAAACCAGCAGAACCTAAGGAAGAAGAAGGTGGCAATGATGGTAATAATGAGAGTAAAGAAGAGAAAGGCGTTGAAGAAGAAGAAGAAGCGAAGAAAAAAGTGGTTGGTGATGAGAATGGAGTGGTGGATAACGTTGATGATGAAAGCATGAAGAGGATGATGTACTCTTACTATTACCAACCACCACTCTATGTTATTGAACCAACCCCACCCCCTCAGCTATTCAGTGATGAAAATCCCAATGCATGTTGCATTTCATAA 924 0.4232 MGEEAKQELAAEENSAEEKQEKESKPPSPCVLFVDLHCIGCAKKIKKSIMKMRGVEGVVIDMAKNQVTIRGRVEPEAICNMITKKTKKRAQVIPPLPEPEGESIPEVVTSQASEAVTVELKISMHCEACAEQLKRKILKLRGVQTAVAELSTGKVIVTGTMDANRLVDYVHRRTKKQVKIVPKPEPEPGPKKEENKESEKPGAEEVKPEEEKEEKEEKEEEKPAEPKEEEGGNDGNNESKEEKGVEEEEEAKKKVVGDENGVVDNVDDESMKRMMYSYYYQPPLYVIEPTPPPQLFSDENPNACCIS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0405 307 CDD HMA 119 159 IPR006121 GO:0046872
Pvu9g0405 307 MobiDBLite consensus disorder prediction 177 266 - -
Pvu9g0405 307 SUPERFAMILY HMA, heavy metal-associated domain 112 173 IPR036163 GO:0046872
Pvu9g0405 307 SUPERFAMILY HMA, heavy metal-associated domain 31 85 IPR036163 GO:0046872
Pvu9g0405 307 MobiDBLite consensus disorder prediction 1 25 - -
Pvu9g0405 307 Pfam Heavy-metal-associated domain 32 85 IPR006121 GO:0046872
Pvu9g0405 307 Pfam Heavy-metal-associated domain 122 170 IPR006121 GO:0046872
Pvu9g0405 307 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 4 307 IPR044258 GO:0046872
Pvu9g0405 307 ProSiteProfiles Heavy-metal-associated domain profile. 36 84 IPR006121 GO:0046872
Pvu9g0405 307 MobiDBLite consensus disorder prediction 1 27 - -
Pvu9g0405 307 Gene3D - 29 92 - -
Pvu9g0405 307 Gene3D - 112 180 - -
Pvu9g0405 307 Coils Coil 2 22 - -
Pvu9g0405 307 ProSiteProfiles Heavy-metal-associated domain profile. 123 157 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0405 Pvu-Chr9 7971648 7974288 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0405 - - var:108331140 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0405 9 7971648 7974288 Pvu9g0405 9 7971648 7974288 ECH
Pvu8g1961 8 49373315 49375853 Pvu9g0405 9 7971648 7974288 PCT