Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1961 ATGGGTGAGGAAGCAAAACAGGAACAACCTGTGGCTGAAGTCAGGCCAGAGGAGAAGCCAGCAGAGGAAAAGAAGGAAGAAAAACCAGAAGAAAAGCCAGCAGAAGAGAAGAAGGAAGAGCCTAAACCACCTTCCCCATGTGTGCTGTTTGTGGACTTGCATTGTGTCGGATGTGCCAAGAAAATTGAGAGATATATTATGAAAATGAGAGGAGTTGAGGGAGTGGTAATTGACATGGCTAAAAATGAAGTGACCATAAAGGGTATAGTGGAGCCTCAAGCGATCTGCAACATAATCACCAAGAAAACAAAGAGAAGAGCCAGTGTTATATCTCCATTGCCTGAAGCAGAAGGAGAACCTATACCAGAAGTTGTCAATTCTCAGGTTAGTGGACCAGTTACTTTGGAACTAAACGTGAACATGCACTGTGAGGCCTGTGCTGATCAACTCAAGAAGAAGATACTACAAATGAGAGGAGTTCAAACAGCAGTGACAGAGTTTACAACAGGGAAGGTTCTTGTGACTGGGACAATGGATGCAAATAAGCTAGTAGATTATGTGTATAGACGCACCAAAAAGCAAGCCAAGATAGTTCCCCAGCCAGAACCGGAACCAGAACCAGAAAAGAAAGAAGAGAGTAAAGAAGGAGAGAAACCTGCTGCAGAAGAGACTAAACCTGAAGAGAAGAAAGAGGAAGAGAAGCCAGCAGAGGAAGCAAAGAAAGAAGAGGGTGGTGAGAATAAGGAGGAAAAGGTTGGTGAAGAAGGCATGGAAGAAGCCAAAAAAGAAGAGAATGTGGTAGTGGCTGCTAATAATATCGATGATGAAGGCTTGAAGAGGATGATGTACTATTATCAATACCCTCCACTCTATGTCATTGAACGAACACCAGCCCCACAACTCTTCAGTGATGAAAATCCTAATGCATGCTGCATTACATGA 942 0.4342 MGEEAKQEQPVAEVRPEEKPAEEKKEEKPEEKPAEEKKEEPKPPSPCVLFVDLHCVGCAKKIERYIMKMRGVEGVVIDMAKNEVTIKGIVEPQAICNIITKKTKRRASVISPLPEAEGEPIPEVVNSQVSGPVTLELNVNMHCEACADQLKKKILQMRGVQTAVTEFTTGKVLVTGTMDANKLVDYVYRRTKKQAKIVPQPEPEPEPEKKEESKEGEKPAAEETKPEEKKEEEKPAEEAKKEEGGENKEEKVGEEGMEEAKKEENVVVAANNIDDEGLKRMMYYYQYPPLYVIERTPAPQLFSDENPNACCIT* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1961 313 CDD HMA 53 108 IPR006121 GO:0046872
Pvu8g1961 313 SUPERFAMILY HMA, heavy metal-associated domain 48 102 IPR036163 GO:0046872
Pvu8g1961 313 ProSiteProfiles Heavy-metal-associated domain profile. 140 174 IPR006121 GO:0046872
Pvu8g1961 313 Gene3D - 46 108 - -
Pvu8g1961 313 MobiDBLite consensus disorder prediction 1 43 - -
Pvu8g1961 313 CDD HMA 136 176 IPR006121 GO:0046872
Pvu8g1961 313 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 313 IPR044258 GO:0046872
Pvu8g1961 313 Pfam Heavy-metal-associated domain 138 184 IPR006121 GO:0046872
Pvu8g1961 313 Pfam Heavy-metal-associated domain 49 95 IPR006121 GO:0046872
Pvu8g1961 313 Gene3D - 131 197 - -
Pvu8g1961 313 ProSiteProfiles Heavy-metal-associated domain profile. 53 101 IPR006121 GO:0046872
Pvu8g1961 313 MobiDBLite consensus disorder prediction 194 263 - -
Pvu8g1961 313 SUPERFAMILY HMA, heavy metal-associated domain 129 193 IPR036163 GO:0046872
Pvu8g1961 313 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1961 Pvu-Chr8 49373315 49375853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1961 - - ccaj:109790710 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1961 8 49373315 49375853 Pvu9g0405 9 7971648 7974288 PCT