Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0340 ATGAAGAAGACGAAGAACACCACACTCCGAGAATGTAGAGGACCAATGCAGCAGAAGCGTCGAACGGTTCCACTGGGCATGCTCAGAAGGTTTCTCGCCGCGTCAATATTCTCCATAGTTGTCACTTCTTTCTTCTTTGTTCACGTTCACGTTTCTCCTTCTCCCACTCATCACAACTTCAGTGACAAGATCCCCTCGTTTTATGACCCGCAAAGCTGGACTCGTGAACTCGTTCCGCCCTATCTATTCAAGACTCCACTCTCTGTTCCCAAGTTGAAGGATTCAAGAAAGGAATCAGACTACGAGAATTTGTGGAAGCCTCCACCATATCACGGGATTATACCCTGCACGAAGCCTACTCCTAACTACACAACTCCTACAAGGTCACGTGGTTACCTTTCAGTTCATACAAATGGGGGGCTAAACCAAATGCGTACTGGGATATGTGATATGGTAGCTATAGCTCGTATCATAAATGCTACTCTAGTGATTCCAGAACTTGATAAAAAGTCATTTTGGCATGATAATAGCAATTTCTCTGATATCTTTGATGATGAGTGGTTTATTAGTTCTCTAGCTAATGATATAAAGATCATTAAGAAGCTTCCCAAGGAACTGGTTAATGCAACTAAAATCGTCATGCAATTCAAAAGCTGGTCTGGTATGGATTACTATGAGAATGAGATTGCTGCCTTGTGGAAAAAATTCAAAATAATTCGAGCTTCCAAATCTGATTCTCGGTTAGCAAATAACAATCTACCTCCAGATATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTTCGTTTCTCTCCACGTATTGAAAAAATGGGAAAAATATTGGTGGAGAGGATGAGGTCATTTGGCCCCTATATTGCATTGCATTTACGTTATGAGAAGGACATGCTTGCATTTAGTGGGTGCACACATGAATTATCTGCAGTTGAGTCTGAAGAGCTACGGCTTATCAGAGAGAACACTACTTATTGGAAAAGAAAATACATAAATCCCATAGAAGAGAGGTCCAAAGGGTTTTGTCCCTTAACTCCAAAGGAGGTTGGAATATTTCTTACTGCTCTTGGATACCCATCAAAGACTCCAATATATATTGCTGCTGGGGAGATATATGGGGCTGAGTTCCATATGACTGACCTGCGATCCCGCTATCCACTGTTAATGAGCAAGGAAAAGCTGGCATCCATTGAGGAGCTTCAACCCTTTTCTAGTCATGGGTCTCAAATGGCTGCTCTGGACTATATTGTATCAGTTGAAAGTAATGTGTTTGTTCACTCTTTCCCTGGAAACATGGCAAAGGCTGTTGAAGGCCATCGCCGTGTTCTCATGAGAGGAAGAACAATATGTCCTGACAGGAAAGCGCTTGTTCGTTTGTTTGATAAACTGGAAAATGGATCAATGACCGAGGGGAAAACATTCTCTAATAAAATTATCGATCTCCACAAAAAACGGCTTGGCTTCTTCAAAAAGAGGAAAGGACCCATTTCTGGAACAAAGGGCTTGGACAGGTTTCGCTCAGAAGAAACATTTTATGCAAACCCTTTACCTGGTTGTTTATGTCGGACAGAATCACTCTCTATAAACGCTTCTCAGTATAGGTTGGCCAGATAA 1629 0.4205 MKKTKNTTLRECRGPMQQKRRTVPLGMLRRFLAASIFSIVVTSFFFVHVHVSPSPTHHNFSDKIPSFYDPQSWTRELVPPYLFKTPLSVPKLKDSRKESDYENLWKPPPYHGIIPCTKPTPNYTTPTRSRGYLSVHTNGGLNQMRTGICDMVAIARIINATLVIPELDKKSFWHDNSNFSDIFDDEWFISSLANDIKIIKKLPKELVNATKIVMQFKSWSGMDYYENEIAALWKKFKIIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEKMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHELSAVESEELRLIRENTTYWKRKYINPIEERSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGAEFHMTDLRSRYPLLMSKEKLASIEELQPFSSHGSQMAALDYIVSVESNVFVHSFPGNMAKAVEGHRRVLMRGRTICPDRKALVRLFDKLENGSMTEGKTFSNKIIDLHKKRLGFFKKRKGPISGTKGLDRFRSEETFYANPLPGCLCRTESLSINASQYRLAR* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0340 542 Pfam GDP-fucose protein O-fucosyltransferase 132 447 IPR019378 -
Pvu9g0340 542 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 14 538 - -
Pvu9g0340 542 PIRSF UCP009360 1 529 IPR024709 -
Pvu9g0340 542 PANTHER OS02G0726500 PROTEIN-RELATED 14 538 - -
Pvu9g0340 542 CDD O-FucT_plant 132 453 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0340 Pvu-Chr9 7162751 7167688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0340 76 529 Miscellaneous Gene Families AT1G22460 64.097 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0340 - - gmx:100807411 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0340 9 7162751 7167688 Pvu9g0340 9 7162751 7167688 ECH
Pvu8g1833 8 46563663 46568882 Pvu9g0340 9 7162751 7167688 PCT