Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1833 ATGCAGAGGCGCAAGTGGATTCCGTTGGCGCTGCTGAGAAAGTTGCTAATTTTAGCCATATGCTTCATAGCGTTTGTGGCTCTCTTCTCCGTGCGCATACACATTGTTCCTTCCTCTAAGGATCACAGGTTCAACGACAAGATCTCCACGGCTCAGGATCTGCAGAGCTGGACGCGAGAGCTCGCACCACCCCATTTGTCCAAAGCTCCACTTTCTACTCCCAAGTGGAATGGTACAAGAGGGTACTTAGATTACCAGAAGTTGTGGAAGCCTCCATCAAATCGTGGGTTTTTGCCTTGTGCAGAGCCCACACCTAACTACACCACTCCTGCAGAGTCGCGAGGATATCTTTTAGTACATACAAATGGTGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTGGCTCGTATCATAAAGGCCACTCTAGTAATTCCAGAACTTGATAAAAGATCATTTTGGCAAGATACTAGCAATTTCTCTGATGTTTTTGATGAAGAGCATTTTATGAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAACTCCCCTACGATCTGGTTAATGAAACCAAAGTGGTCAAGCAATTCATAAGCTGGTCTGGCATGGATTACTACGAGAATGAGATTGCTAGCTTGTGGGCAGATTACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAATCTACCTCCGGACATACAGAAGCTTCGTTGCCGGGCTTGTTATGAAGCACTTCGCTTCTCTCCTCGCATTGAAAAACTGGGAAAACTGTTGGTAGAGAGGATGAGGTCATTTGGTCCTTACATTGCGCTGCATTTGCGTTACGAGAAGGATATGCTTGCATTTAGTGGCTGCACCCATGATTTATCTCTTGTTGAAGCTGAAGAGCTTCGGATGATCAGAGAGAACATTTCCTATTGGAAAATAAAGGAGATTGATCCAATAGAACAGAGGTCCAAAGGGCTTTGCCCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACTGCTCTTGGATACCCATCAACAACTCCGATATATATTGCTGCTGGAGAGATATATGGGGGCGAGTCTCACATGGCTGAATTGCGTTCCCGATATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAAGAGCTTGAACCTTTTTCCAATCATGCATCCCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTCATACCTTCTTATTCCGGAAACATGGCGAAGGCTGTTGAGGGTCATCGTCGATTTCTTGGACGTGGAAGAACAATATCTCCAGATAAGAAAGTCCTCGTTCGCCTGTTTGATAAACTGGATCAGGGACTAATGACGGAGGGGAAGAAATTATCAAATAGGATTATTGATCTCCACCGAAGACGACTTGGTTCTCCTAGAAAGAGAAAAGGGCCAATTTCTGGGACAAAGGGGATGGAAAGGTTCCGGTCAGAAGAAACCTTTTATGCTAATCCCCTACCTGATTGTTTATGCCGGAGAGAACCAGCACCAGCTCTAAACATCTCTCACATTGTTTGA 1575 0.4394 MQRRKWIPLALLRKLLILAICFIAFVALFSVRIHIVPSSKDHRFNDKISTAQDLQSWTRELAPPHLSKAPLSTPKWNGTRGYLDYQKLWKPPSNRGFLPCAEPTPNYTTPAESRGYLLVHTNGGLNQMRSGICDMVAVARIIKATLVIPELDKRSFWQDTSNFSDVFDEEHFMNSLANDVKIIKKLPYDLVNETKVVKQFISWSGMDYYENEIASLWADYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEKLGKLLVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSLVEAEELRMIRENISYWKIKEIDPIEQRSKGLCPLTPKEVGIFLTALGYPSTTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGHRRFLGRGRTISPDKKVLVRLFDKLDQGLMTEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKGMERFRSEETFYANPLPDCLCRREPAPALNISHIV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1833 524 CDD O-FucT_plant 116 437 IPR024709 -
Pvu8g1833 524 PANTHER OS02G0726500 PROTEIN-RELATED 4 523 - -
Pvu8g1833 524 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 4 523 - -
Pvu8g1833 524 PIRSF UCP009360 1 514 IPR024709 -
Pvu8g1833 524 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1833 Pvu-Chr8 46563663 46568882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1833 60 517 Miscellaneous Gene Families AT1G22460 70.524 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1833 - - gmx:100795727 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1833 8 46563663 46568882 Pvu8g1833 8 46563663 46568882 ECH
Pvu8g1833 8 46563663 46568882 Pvu9g0340 9 7162751 7167688 PCT