Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0324 ATGAGAGGTGGCGGTGGATGCAGCATAGTGTGGTTCAGAAGAGATCTGAGGGTAGAGGACAACCCTGCACTGACGGCAGGAGTAAGAGCTGGTGCTGTGGTTGCAGTTTTCATCTGGGCACCTGAAGAAGAAGGGCAGTACTACCCCGGCAGAGTCTCCAGGTGGTGGCTCAAACAAAGCTTGGCTCATCTTGATTCTTCTCTCAGGAATCTTGGCACTCGTCTCATCACTAAGCGATCCACTGATACTGTTTCTTCTCTCCTCGAGGTTCTTAAGTTCACTGGAGCTACTCAACTCTATTTTAATCATTTATATGATCCCCTGTCACTTGTAAAGGATCACCGAGTAAAAGAGGTTCTAAATGCTAAGGGCATAACAGTACGTTCCTTCAACGCAGATTTACTATATGAACCATGGGATGTGAATGATGTCCATGCTCGACCATTCACAACTTTTGCTGCTTTCTGGGACAGATGTCTTAACATGCCTTATGACCCCGACTCTCCTCTTCTTCCACCTAAAAGGATAATTCCAGGTGATGTGTCGAGATGCCCTAGTGATAGATTGGTGTTTGAAGATGAATCAGAGAAGGCAAGCAATGCACTTCTTGCTAGAGCATGGTCACCAGGGTGGAGCAATGCTAACAAGGCATTGACAGCCTTCATAAATGGTCCACTGATAGAGTACTCAACAAATTGCAGGAAGGCTGACAGTGCCACTACCTCACTTCTCTCACCCCATTTGCATTTTGGTGAGTTGAGTGTCAAGAAGGTCTTCCATCTTGTCCGCATCAAACAACTTTTGTGGGCCAACGAAGGAAACAAGGCCAGTGAAGAGAGTGTGAACTTGTTCCTTAAATCTATTGGTCTTAGAGAATATTCGAGGTACATTAGTTTCCACCACCCCTACAGTCATGAAAGGCCTCTTCTAGGCCACCTTAAGTTCTTTCCTTGGGTTGTAAATGAGGCTTATTTTAAGGCATGGAGACAGGGCAGAACTGGGTACCCTTTAGTGGATGCAGGGATGAGGGAGTTGTGGGCTACTGGTTGGCTGCATGATCGCATACGTGTTGTAGTTTCCAGTTTTTTTGTGAAAGTTCTGCAGCTTCCTTGGAGATGGGGAATGAAATATTTCTGGGACACCCTTTTGGATGCAGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATAACTGGTACACTCCCTGATGGTCGTGAATTTGACCGAATCGATCATCCACAGTTTGAGGGCTATAAATTCGACCCCAATGGAGAATATGTGCGACGCTGGCTTCCAGAACTTGCAAGATTACCTACTGAGTGGATACATCATCCTTGGAATGCACCAGAATCAGTGCTCCAAGCTGCTGGAATTGAGCTAGGATCCAACTATCCTCTTCCAATTGTGGGAATAGATGCAGCAAAAACTAGATTACAAGAGGCATTATCAGAAATGTGGCAACTAGAGGCTACTTCAAGAGCTGAAGTGGAAAATGGAACTGAGGAAGGACTTGGAGAATCCTCTGAATCAATTCCTGCTGCTTTTGCGCAAGACACGCAAATGGAGGAAACTCATGAACCTGTTAGGAACAATCCCCTTCCTGTTGCTCGAAGCTTCCTGGATCAGATGGTTCCAAGCATCACTTCCACCCTGCTGAGAGTAGAAGACGAAGAAACTACTTCTGATCTTCGAAACTCAGCAGAAGAGAGCAGCGCAGCTGAAGTGCCAATAAATGTAAATGCACAACAGAATGCAGGAGGAGTTACATGGAACGAACGGATCTTGCAGAGTGCTCATAGGAATACACAAGTACAATACAATACTACAATGGAGCTAAGAAACGTAGCTGAAGATTCTGCCGTAGAATCTTCAAGTGGTACCAGGAGAGAACGGGATGGAGGTTCAGTTCCAGTATGGTCTCCCCCTGCTTCCAGTGACTCAGAACAATTTGTAGGAGATGAAAATGGTATTACAAACCTCTTCCTTGCAAAGGCATCCTCGGTCTCACCAATTACTGAATTGTAA 2025 0.4563 MRGGGGCSIVWFRRDLRVEDNPALTAGVRAGAVVAVFIWAPEEEGQYYPGRVSRWWLKQSLAHLDSSLRNLGTRLITKRSTDTVSSLLEVLKFTGATQLYFNHLYDPLSLVKDHRVKEVLNAKGITVRSFNADLLYEPWDVNDVHARPFTTFAAFWDRCLNMPYDPDSPLLPPKRIIPGDVSRCPSDRLVFEDESEKASNALLARAWSPGWSNANKALTAFINGPLIEYSTNCRKADSATTSLLSPHLHFGELSVKKVFHLVRIKQLLWANEGNKASEESVNLFLKSIGLREYSRYISFHHPYSHERPLLGHLKFFPWVVNEAYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGREFDRIDHPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKTRLQEALSEMWQLEATSRAEVENGTEEGLGESSESIPAAFAQDTQMEETHEPVRNNPLPVARSFLDQMVPSITSTLLRVEDEETTSDLRNSAEESSAAEVPINVNAQQNAGGVTWNERILQSAHRNTQVQYNTTMELRNVAEDSAVESSSGTRRERDGGSVPVWSPPASSDSEQFVGDENGITNLFLAKASSVSPITEL* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0324 674 Gene3D HUPs 9 207 IPR014729 -
Pvu9g0324 674 ProSitePatterns DNA photolyases class 1 signature 1. 333 345 IPR018394 -
Pvu9g0324 674 PANTHER CRYPTOCHROME 5 587 IPR002081 -
Pvu9g0324 674 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 6 135 IPR006050 -
Pvu9g0324 674 Gene3D - 135 294 - -
Pvu9g0324 674 Pfam DNA photolyase 8 162 IPR006050 -
Pvu9g0324 674 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 195 489 IPR036134 -
Pvu9g0324 674 TIGRFAM crypt_chrom_pln: cryptochrome, plant family 7 483 IPR014134 GO:0009785|GO:0009882
Pvu9g0324 674 ProSitePatterns DNA photolyases class 1 signature 2. 353 372 IPR018394 -
Pvu9g0324 674 Pfam FAD binding domain of DNA photolyase 284 482 IPR005101 -
Pvu9g0324 674 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 8 179 IPR036155 -
Pvu9g0324 674 PRINTS DNA photolyase signature 333 349 IPR002081 -
Pvu9g0324 674 PRINTS DNA photolyase signature 353 371 IPR002081 -
Pvu9g0324 674 PRINTS DNA photolyase signature 392 406 IPR002081 -
Pvu9g0324 674 MobiDBLite consensus disorder prediction 615 651 - -
Pvu9g0324 674 PANTHER CRYPTOCHROME-1 5 587 - -
Pvu9g0324 674 Coils Coil 471 491 - -
Pvu9g0324 674 MobiDBLite consensus disorder prediction 553 578 - -
Pvu9g0324 674 Pfam Blue/Ultraviolet sensing protein C terminal 512 628 IPR020978 -
Pvu9g0324 674 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 302 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0324 Pvu-Chr9 6908922 6918325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0324 K12118 - gmx:100797839 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0324 9 6908922 6918325 Pvu9g0324 9 6908922 6918325 ECH
Pvu8g1801 8 45687134 45692713 Pvu9g0324 9 6908922 6918325 PCT