Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0310 ATGGAAGGGAAAACCAAGGACAGGGTGGACTTTGATGTGGGTTGCGGTTTGGTGGGGAAAATTTTCCACCTCAAAACCAATAACAGGCCAAGAAAATCCTCTGTTCATTCACTACCCATGAAGGCTTGCAACACTGCACAACAGAGAGAGCAGGCTAAAAACGAGCTCAAATCCCCTCTAAACCATGAACCAAAGGTTCCACGGGATAGCGCCATTGGAATCAATCCTACACTGAAGGGGGAGCAGAATCCTGCGAGAAAGAGTAGCTCTAGTCACCGTGCACCTTCTGCATACCGAAACACTCCAAATGAGAGACCCTCAGACGCTGCAAGAACCTCAATTCGACAAGCCCATGACCCAAATGACGAGAGTAAGCAACAGAAAGAGAACTCTGGTAATTCTCTGGAACTTGCTAGGATAAGTACAAGTGCTAGTCATCATCAGAACAACGAGACCAAATCCCCAGCCAAAGAATTTGTGTTACCAATAACTGGGAATTTGCTTGTGAATAGCAGCCCCCGAACTAGTGTTACCAAGAGCAAGGAGTCGAACTTCAAGTCCGGTTCCTCTGCTTACAGTAGTAACGGCAACAAAGGCGTGATGGGGAATATCATGAGGAAGAACAGCAATGAGCTTGCGCAATTTCGAAGTCCAAGGAACAGCAGAGCGGACCCGGAGGAGATGAAGTCGATGGGGAATGAAGCCTACAAGCTAGGAAGATTTGAAGAGGCTTTGGTTTTGTATGACAGAGCCATTGCTCTTGACTCCAATAAGGCAACCTATCATTGCAATAAGAGCGCAGCTTTGATGGGGTTGGGAAGGTTTCTGCAGGCAATTGTCGAGTGCGAGGAAGCTATCAGATTGGAGCCTTCTTATGGCAGAGCCCACGACCGTTTGGCAACAATTTATTTCAGACTGGGAGAAGCAGAAAAGGCACTGAATTGCAATGAAACAAGCCCATGTGTTGATTCCGTTCTCACTTTACAAGCGCAGGCTCTTCAAAATCACCTTACCAAATGCACTGAAGCTCGGAAAGCCAAAGACTGGAAAGCTATATTAAAGGAAACACAGGCTGCAGTATCTTTAGGTGCTGATTCAGCTCCACAGGTCTATTGTTTACAAACTGAAGCCTTGCTGAAGCTCCTAAGACATCAAGAGGCATACGCTACCTACGAGAAAATGCCAAAATTTGACCTTGATAGTTGTAAGAAAATATTCGGCCCAGCTCGTAGTGCTTACCTCATGATGATAGCTGCGCAAATTTACTTGGCAGCCGGCAGGTTTGAGGATGCTGTAAGGACATCTCAGCAAGCAGCTAAACTAGATCCAAGTAACTTTGAGGTGAATGCAGTGGTGAGGAAAGCCAGAGCAGTGACATCAGCCAGAATGAGTGGTAACTTACTCTTCAAGGCATCAAAATTGACGGAAGCATGCGCTGTATACAATGAAGGACTAGAGCATGATCCATACAACTCAGTTCTTCTATGCAATAGGGCAGCATGTCGTTCTAAGCTAGGTCAATTTGAGAAAGCAATTGAAGATTGCAACGTAGCACTTATAGTTCAGCCTAGTTATAGCAAGGCAAGGTTGAGAAGGGCAGATTGTAATGCCAAGTTGGAGCGATGGGAAGCTGCGATTCAAGACTATGAAATGCTATTAAGAGAAAAGCCAGGGGATGAGGAGGTGGCCAGAGCTCTGTTTGAGACTCAGCTTCAGCTCAAGATGCTGCGTGGAGAAGATATTAAGGACTTGAAATTTGGTTCAAATTTGTTTTTCATCTCAACCAATGACCGGTTCAGACACTACGTAACATCACCTGGGATGTCTGTGGTGCTCTTTTGCAACAAGGCAACCCACAAACAAGTATTGTTGGTGTTGGAGCAAACCTGCAAGAGATTTCCATCGGTTAATTTTCTTAAGGTGGAGATTGAAGACCACCCCTACTTGGCAAAATCAGAAGGTGTGAACTGCATCCCAGCCTTTAAAATATACAAGAATGGATCAAGGGTTAAAGAAATTCCAGGCAACAACCACGAGTTGTTAGAAAAATTAGTTAAATTATATAGCAGTTGA 2073 0.4496 MEGKTKDRVDFDVGCGLVGKIFHLKTNNRPRKSSVHSLPMKACNTAQQREQAKNELKSPLNHEPKVPRDSAIGINPTLKGEQNPARKSSSSHRAPSAYRNTPNERPSDAARTSIRQAHDPNDESKQQKENSGNSLELARISTSASHHQNNETKSPAKEFVLPITGNLLVNSSPRTSVTKSKESNFKSGSSAYSSNGNKGVMGNIMRKNSNELAQFRSPRNSRADPEEMKSMGNEAYKLGRFEEALVLYDRAIALDSNKATYHCNKSAALMGLGRFLQAIVECEEAIRLEPSYGRAHDRLATIYFRLGEAEKALNCNETSPCVDSVLTLQAQALQNHLTKCTEARKAKDWKAILKETQAAVSLGADSAPQVYCLQTEALLKLLRHQEAYATYEKMPKFDLDSCKKIFGPARSAYLMMIAAQIYLAAGRFEDAVRTSQQAAKLDPSNFEVNAVVRKARAVTSARMSGNLLFKASKLTEACAVYNEGLEHDPYNSVLLCNRAACRSKLGQFEKAIEDCNVALIVQPSYSKARLRRADCNAKLERWEAAIQDYEMLLREKPGDEEVARALFETQLQLKMLRGEDIKDLKFGSNLFFISTNDRFRHYVTSPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVNCIPAFKIYKNGSRVKEIPGNNHELLEKLVKLYSS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0310 690 MobiDBLite consensus disorder prediction 81 110 - -
Pvu9g0310 690 MobiDBLite consensus disorder prediction 31 54 - -
Pvu9g0310 690 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 689 IPR044534 -
Pvu9g0310 690 Coils Coil 532 552 - -
Pvu9g0310 690 MobiDBLite consensus disorder prediction 169 203 - -
Pvu9g0310 690 Pfam Thioredoxin 620 683 IPR013766 -
Pvu9g0310 690 Gene3D Tetratricopeptide repeat domain 223 577 IPR011990 GO:0005515
Pvu9g0310 690 MobiDBLite consensus disorder prediction 29 135 - -
Pvu9g0310 690 SMART tpr_5 225 258 IPR019734 GO:0005515
Pvu9g0310 690 SMART tpr_5 412 445 IPR019734 GO:0005515
Pvu9g0310 690 SMART tpr_5 458 491 IPR019734 GO:0005515
Pvu9g0310 690 SMART tpr_5 259 292 IPR019734 GO:0005515
Pvu9g0310 690 SMART tpr_5 526 559 IPR019734 GO:0005515
Pvu9g0310 690 SMART tpr_5 492 525 IPR019734 GO:0005515
Pvu9g0310 690 ProSiteProfiles TPR repeat profile. 412 445 IPR019734 GO:0005515
Pvu9g0310 690 Gene3D Glutaredoxin 587 689 - -
Pvu9g0310 690 SUPERFAMILY Thioredoxin-like 577 686 IPR036249 -
Pvu9g0310 690 Pfam Tetratricopeptide repeat 504 559 - -
Pvu9g0310 690 Pfam Tetratricopeptide repeat 418 492 - -
Pvu9g0310 690 Pfam TPR repeat 232 273 - -
Pvu9g0310 690 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 689 - -
Pvu9g0310 690 CDD TRX_family 599 684 - -
Pvu9g0310 690 SUPERFAMILY TPR-like 224 448 IPR011990 GO:0005515
Pvu9g0310 690 SUPERFAMILY TPR-like 463 574 IPR011990 GO:0005515
Pvu9g0310 690 MobiDBLite consensus disorder prediction 111 126 - -
Pvu9g0310 690 ProSiteProfiles TPR repeat profile. 225 258 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0310 Pvu-Chr9 6632086 6635884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0310 K09527 - gmx:100814381 1170.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0310 9 6632086 6635884 Pvu9g0310 9 6632086 6635884 ECH
Pvu8g1789 8 45232852 45236333 Pvu9g0310 9 6632086 6635884 PCT