Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0302 ATGGCCCTCAGCTTCACCTTTGCAACCATCATTTTCCTCACTCTTCACACTGCTCACTCATCTAACCCACCATTCGCTTGTGATTGGTCAAACCCTTCCTCCAAATCCTACCCTTTCTGCAACCCCAAACTCCCCATCCCCCAAAGAACCAAAGACCTTCTCTCCAGACTCACACTCCAAGAGAAACTCTCCCAACTCGTCAACACCGCGCCTTCCATCCCCCGCCTCGGCATCCCCGCCTACCAGTGGTGGAGCGAGGCCCTTCACGGCGTAGGAAGCGTTGGCCCCGGCATCCGCTTCAACGCCTCCATCTCCTCCGCCACCAGCTTCCCTCAGGTCATCCTCAGCGCAGCCACCTTCGACTCCCTCCTCTGGTACCGCATCGGACGCGCCATTGGGATCGAAGCCCGCGCAATCTATAATGCAGGCCAGGCCCAGGGGCTCACCTTCTGGGCTCCCAATATTAACATCTTCAGGGACCCGCGATGGGGCCGAGGACAAGAGACACCCGGCGAAGACCCTCTCCTCACTTCTGGCTACGCAGTTTCCTACGTCAGAGGCCTCCAAGGAGACTCCTTTCACGGAGGCAAGTTGAGGGGCCACCTTCAAGCCTCCGCCTGTTGCAAACACTTCACGGCTTACGATCTTGACAATTGGAAGGGCGTGGATCGCTTTCTCTTCGACGCTCGCGTGAGTTTGCAAGATTTAGCGGACACATACCAGCCTCCGTTTCAGAGTTGCGTACAGCAAGGAGGGGCCAGTGGGATCATGTGTGCTTACAACCGCGTGAACGGGGTTCCGAGCTGTGCGGATTTCAACCTGTTAACCAAAACAGCCAGAAAAGAATGGCATTTCCGTGGCTATATTACGTCGGATTGTGGGGCAGTGGGGATCATTCATGACCAGCAAGGATTTGCAAAATCATCGGAGGATGCTGTAGCTGATGTTCTTCGTGCTGGGATGGATGTGGAATGTGGTACTTATTTGACGGATCATGCTAAATCCGCAGTGCTGCAGAAAAAAGTATCCATGTCTGAAATAGACCGTGCCCTTCACAACCTGTTTTCTATTAGAATGAGGCTAGGCCTGTTTGATGGAAATCCAAGCAGTCTTCCATTTGGCATGATTGGTCCCAATCATGTATGTTCCAAAGAGCACCAATATCTGGCTCTTGAAGCTGCAAGAAATGGCATTGTCCTCTTAAAAAACTCTCCCACACTTCTACCACTTCCAAAAACAAGCCCCAGCATTTCCTTAGCAGTGATAGGTCCCAATGCCAATGCTTCTCCACTAACTCTTCTTGGAAACTATGCTGGCCCTCCTTGTAAATCTGTGACCATATTGCAAGGGTTTCAGCACTACGTTAAGAACGCCGTTTATCATCCTGGCTGTGATGGTGGACCAAAGTGTTCTTCGGCTCAAATTGAGCAGGCAGTGGAAGTTGCAAAAAAAGTGGATTATGTGGTGCTGGTTATGGGATTGGATCAAAGTGAAGAGAGGGAAGAACGTGATCGCATTCATCTAGACTTGCCAGGCAAGCAACTTGAACTCGTCAACAGCGTTGCTGAAGCTTCTAAGAAACCAGTTATTTTGGTGCTGCTTTGTGGAGGGCCTGTAGATATTAGTTCAGCCAAGTATAACCACAAAATTGGAGGCATCCTCTGGGCAGGTTATCCCGGAGAACTTGGAGGCATTGCACTTGCACAAATTATCTTTGGGGACCACAACCCAGGAGGAAGACTGCCAGTTACTTGGTACCCAAAAGATTACATCAAAGTACCCATGACAGACATGAGAATGAGAGCTGATCCTTCTACTGGCTATCCTGGGAGAACTTACCGATTTTACAAAGGTCCAAAAGTGTATGACTTTGGCTATGGACTAAGCTACTCAAAGTATTCCTATGAGTTTGTTTCTGTTACACATGCCAAGCTTCACTTGAACCAATCATCCACTCATTTGATGGTTGAAAATTCAGAAACCGTAAGGTACAAACTAGTTTCGGAGTTGGGAGAACAAACCTGCCAAAGCATGTCACTCTCGGTCACAGTGAGAGTTCAAAATCATGGAAGCATGGTAGGGAAGCATCCTGTATTGCTGTTTATGAGGCCTAAAAACCAGAAAAGTGGAAACCCTGTGAAACAGTTGGTTGGTTTCCAGAGTGTGATGCTTGATGCAGGGGAAATGACTCATGTTGGATTCGCGGTAAGTCCTTGTGAACATCTTAGTAGAGCAAATGAAGATGGTGCAATGATTATTGAAGAAGGGTCTCAGGTGTTGCTTTTGGATGATCAAGAGCACCCAATTGATATAATTGTTTGA 2322 0.4879 MALSFTFATIIFLTLHTAHSSNPPFACDWSNPSSKSYPFCNPKLPIPQRTKDLLSRLTLQEKLSQLVNTAPSIPRLGIPAYQWWSEALHGVGSVGPGIRFNASISSATSFPQVILSAATFDSLLWYRIGRAIGIEARAIYNAGQAQGLTFWAPNINIFRDPRWGRGQETPGEDPLLTSGYAVSYVRGLQGDSFHGGKLRGHLQASACCKHFTAYDLDNWKGVDRFLFDARVSLQDLADTYQPPFQSCVQQGGASGIMCAYNRVNGVPSCADFNLLTKTARKEWHFRGYITSDCGAVGIIHDQQGFAKSSEDAVADVLRAGMDVECGTYLTDHAKSAVLQKKVSMSEIDRALHNLFSIRMRLGLFDGNPSSLPFGMIGPNHVCSKEHQYLALEAARNGIVLLKNSPTLLPLPKTSPSISLAVIGPNANASPLTLLGNYAGPPCKSVTILQGFQHYVKNAVYHPGCDGGPKCSSAQIEQAVEVAKKVDYVVLVMGLDQSEEREERDRIHLDLPGKQLELVNSVAEASKKPVILVLLCGGPVDISSAKYNHKIGGILWAGYPGELGGIALAQIIFGDHNPGGRLPVTWYPKDYIKVPMTDMRMRADPSTGYPGRTYRFYKGPKVYDFGYGLSYSKYSYEFVSVTHAKLHLNQSSTHLMVENSETVRYKLVSELGEQTCQSMSLSVTVRVQNHGSMVGKHPVLLFMRPKNQKSGNPVKQLVGFQSVMLDAGEMTHVGFAVSPCEHLSRANEDGAMIIEEGSQVLLLDDQEHPIDIIV* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0302 773 SUPERFAMILY (Trans)glycosidases 37 396 IPR017853 -
Pvu9g0302 773 Pfam Glycosyl hydrolase family 3 N terminal domain 103 354 IPR001764 GO:0004553|GO:0005975
Pvu9g0302 773 Gene3D - 49 370 IPR036962 GO:0004553|GO:0005975
Pvu9g0302 773 PRINTS Glycosyl hydrolase family 3 signature 110 129 IPR001764 GO:0004553|GO:0005975
Pvu9g0302 773 PRINTS Glycosyl hydrolase family 3 signature 204 220 IPR001764 GO:0004553|GO:0005975
Pvu9g0302 773 PRINTS Glycosyl hydrolase family 3 signature 278 296 IPR001764 GO:0004553|GO:0005975
Pvu9g0302 773 Pfam Glycosyl hydrolase family 3 C-terminal domain 398 630 IPR002772 GO:0004553|GO:0005975
Pvu9g0302 773 SMART Fn3_like_2 696 766 IPR026891 -
Pvu9g0302 773 Pfam Fibronectin type III-like domain 698 759 IPR026891 -
Pvu9g0302 773 Gene3D Immunoglobulins 658 772 IPR013783 -
Pvu9g0302 773 Gene3D - 383 631 IPR036881 GO:0004553|GO:0005975
Pvu9g0302 773 PANTHER SUGAR HYDROLASE-RELATED 3 772 IPR044993 GO:0009044|GO:0045493
Pvu9g0302 773 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 3 772 - -
Pvu9g0302 773 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 398 633 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0302 Pvu-Chr9 6475653 6480783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0302 13 773 Glycoside Hydrolase AT1G78060 65.314 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0302 - - aprc:113867121 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0302 9 6475653 6480783 Pvu9g0302 9 6475653 6480783 ECH
Pvu8g1781 8 44935946 44937592 Pvu9g0302 9 6475653 6480783 PCT