Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1781 ATGGGGTTGGATCAAAGTCAAGAGAGGGAGTCACATGACAGAGAATTCCTAGGTTTGCCAGGGAAGCAAGAAGAGTTGATCAAGAGTGTGGCCAAGGCTTCAAAGAGGCCAGTTGTTTTGGTGCTGTTGTGTGGAGGGCCAGTGGATATCACTTCAGCCAAGTTTGATAACAAAGTTGGAGGAATCTTGTGGGCTGGGTACCCAGGAGAAGTTGGAGGAGTGGCCCTGGCACAAGTTATCTTTGGTGACCATAACCCAGGTGGTAAACTGCCAATGACTTGGTACCCCAAGGATTTCATCAGAATACCAATGACTGATATGAGGATGAGAGCTGATCCAGCCTCAGGCTACCCGGGGAGAACCTACAGATTTTACACTGGTCCAAAGGTCTATGAATTTGGCTATGGCCTAAGCTACACAAAATATTCCTATAATCTCCTTTCTCTCTCACACAGCACCCTCCACATCAACCAACCCTCCACCCATTTGATGACTGAAAATTCTGAAACCATCCGTTACAAACTGTTTTCAGTGTTGGGAGAACAAACATGCCAATCCATGTCATTGTCAATCACTTTGGGAGTCACAAATCATGGTAACATGGCAGGGAAGCATCCAGTGTTGTTGTTTTTGAAGAAGGAACAAGTGGGAAAAGGGAATCCGGTGAAACAATTGGTGGGGTTTCAAAGTGTGAACTTAAATGCAGGGGAAACTGCTCAAGTGGGTTTTGAGCTAAGCCCGTGTGAGCATCTTAGCATGGCAAACGAAGCTGGTATATTGGTGATTGAAGAAGGGTCTTATTTGTTGCTTGTGGGGGACCAAGAGTACCCATTAAAAGTGACAGTTTGA 849 0.457 MGLDQSQERESHDREFLGLPGKQEELIKSVAKASKRPVVLVLLCGGPVDITSAKFDNKVGGILWAGYPGEVGGVALAQVIFGDHNPGGKLPMTWYPKDFIRIPMTDMRMRADPASGYPGRTYRFYTGPKVYEFGYGLSYTKYSYNLLSLSHSTLHINQPSTHLMTENSETIRYKLFSVLGEQTCQSMSLSITLGVTNHGNMAGKHPVLLFLKKEQVGKGNPVKQLVGFQSVNLNAGETAQVGFELSPCEHLSMANEAGILVIEEGSYLLLVGDQEYPLKVTV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1781 282 Gene3D Immunoglobulins 140 282 IPR013783 -
Pvu8g1781 282 SMART Fn3_like_2 205 275 IPR026891 -
Pvu8g1781 282 PANTHER SUGAR HYDROLASE-RELATED 1 281 IPR044993 GO:0009044|GO:0045493
Pvu8g1781 282 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 1 281 - -
Pvu8g1781 282 Pfam Fibronectin type III-like domain 207 274 IPR026891 -
Pvu8g1781 282 Pfam Glycosyl hydrolase family 3 C-terminal domain 2 139 IPR002772 GO:0004553|GO:0005975
Pvu8g1781 282 Gene3D - 1 139 IPR036881 GO:0004553|GO:0005975
Pvu8g1781 282 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 4 142 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1781 Pvu-Chr8 44935946 44937592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1781 1 282 Glycoside Hydrolase AT1G78060 57.746 2.82e-116 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1781 - - pvu:PHAVU_008G171800g 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1781 8 44935946 44937592 Pvu8g1781 8 44935946 44937592 ECH
Pvu8g1781 8 44935946 44937592 Pvu9g0302 9 6475653 6480783 PCT