Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0301 ATGAGTGAGGATCAGAAAAAAACTGTCTCCAACGGTCATGATGAAATGGTAGTTTCACAAGAACTGCAGGCCAAGATCACTGAGGTGAGAGGGTTGATAGGGCAGCTATCAGATAAGGAATCTGCGTATTGTTCTGATGCATCCATTTCAAGGTATTTATTGTCACGCAATTCAAATGTTAAGAAAGCAGCTCAAATGTTGAAACAAAGCCTGAAATGGAGAAAAGAATACAAACCAGAAGAGATCCGCTGGGAAGAGGTTGCTGATGAAGCAGAGTTAGGGTCGATGTATAGACCCAATTATCATGACAAGTGTGGGAGATCGGTGATTATAATGACACCTGGTAGCAAGAGCTCCAGATCAGCACAGACAGTGAAGTATTTAGTATACTGCATGGAGAATGCCATTTTAAATCTTCCAGCACACCAGGAACAGGTGGTTTGGCTGGTAGATTTAAAGGGTATCAAGATGTCGGATATATCGTTCAAAATGGCACGTGAAATTGTCCATGTAATACAAGACTATTATCCAAAACGCTTGGGTTTGATAATTCTGTTAAATGCGCCTATAGTCTTCCAACCATTTTTCAAGATGATAAGGCCGTTTTTGGAAACTGAAATGTACAATAAAGTAAAGTTTTACTATTGGGACGACCACAAGGATAAGAAGATTTTGGAGGATTTATTTGATATGGATAAACTTGAATCTGCATTTGGTGGGAATGGTGACAAAGGATTTGACGTAAATAAATATGCTGAGAGAATGAAAGAGGATGACAACAAGATTCTTTCTTTGGGGACACAGGTCAAGTCTGTGTCATAA 822 0.3929 MSEDQKKTVSNGHDEMVVSQELQAKITEVRGLIGQLSDKESAYCSDASISRYLLSRNSNVKKAAQMLKQSLKWRKEYKPEEIRWEEVADEAELGSMYRPNYHDKCGRSVIIMTPGSKSSRSAQTVKYLVYCMENAILNLPAHQEQVVWLVDLKGIKMSDISFKMAREIVHVIQDYYPKRLGLIILLNAPIVFQPFFKMIRPFLETEMYNKVKFYYWDDHKDKKILEDLFDMDKLESAFGGNGDKGFDVNKYAERMKEDDNKILSLGTQVKSVS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0301 273 PRINTS Cellular retinaldehyde-binding protein signature 48 70 - -
Pvu9g0301 273 PRINTS Cellular retinaldehyde-binding protein signature 163 184 - -
Pvu9g0301 273 PRINTS Cellular retinaldehyde-binding protein signature 196 215 - -
Pvu9g0301 273 Gene3D - 1 270 IPR036865 -
Pvu9g0301 273 SUPERFAMILY CRAL/TRIO domain 84 259 IPR036865 -
Pvu9g0301 273 SMART sec14_4 90 243 IPR001251 -
Pvu9g0301 273 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 273 - -
Pvu9g0301 273 CDD SEC14 92 241 IPR001251 -
Pvu9g0301 273 PANTHER GH16843P 1 273 - -
Pvu9g0301 273 Pfam CRAL/TRIO domain 100 240 IPR001251 -
Pvu9g0301 273 SUPERFAMILY CRAL/TRIO N-terminal domain 19 86 IPR036273 -
Pvu9g0301 273 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 246 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0301 Pvu-Chr9 6457469 6459826 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0301 - - gmx:100802091 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1780 8 44845452 44850960 Pvu9g0301 9 6457469 6459826 PCT