Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1780 ATGAGTGTGGATCCAAAGAAAGCGGCCTCTATCGGCCAGGAGAAAATGTTAACATCACCAGAACAGCAGGCATTGATCAATGAGGTGAGAAGGTTAATTGGGCCACAGTCTGGTAAGGCATCTATTTTTTGTTCTGATGCCTCCATCTCAAGGTATTTGAGGGCACGGAATTGGAATGTGAAGAAGGCAGCTAAAATGTTGAAACTGACCCTGAAATGGAGACAAGAATACAAACCGGAAGAAATCCGCTGGGAAGATGTTGCTCATGAAGCAGAGACAGGAAAAATATATAGATCAAATTATATTGACAAGCATGGGAGAACTGTCCTAGTAATGAGACCTAGTCGACAGAACTCAAAGTCAACTAAAGGACAAATTAAATATTTGGTATACTGCATGGAGAATGCTGTTTTTAATCTTCCACCAGAACAAGAACAAATGGTCTGGTTGATTGACTTCCAGGGTTTCAATATGTCACATATATCAATAAAGGTGACACGTGAAACTGCCCATGTATTACAAGAACATTATCCTGAACGCCTGGGTCTGGCAATACTTTACAATGCACCCAAGTTCTTTGAACCATTTTTCACGATGGTAAAGCCGATACTAGAGCCTAAGACTTATAATAAAGTCAAGTTCGCATACTCTGATGATCAGAACACCAAGAAGATTATGGAGGATTTGTTTGACTTTGACCAACTTGAAACTGCATTTGGTGGGAATGATGATACAGGATTTGACATAAACAAATATGCTGATAGAATGAAAGAGGATGACAAGAAGATTCCTGCTTTCTGGACTAGGGAAAACTCCCCATCATCAGTTCCAAATCATGTTCCTTCTTTAGATTCTACTAGGTTAGACTCAAATACTGATGGTTCGGACAATGAGAAACTAGACTCTTCCCCTGACCTCGTGGTGGACACAGGTATCATTAACCCGGACCATAAAAGCTTGGTTAGTGAAGGAGAAAGAAATACCAGTGCAGATTAG 996 0.4036 MSVDPKKAASIGQEKMLTSPEQQALINEVRRLIGPQSGKASIFCSDASISRYLRARNWNVKKAAKMLKLTLKWRQEYKPEEIRWEDVAHEAETGKIYRSNYIDKHGRTVLVMRPSRQNSKSTKGQIKYLVYCMENAVFNLPPEQEQMVWLIDFQGFNMSHISIKVTRETAHVLQEHYPERLGLAILYNAPKFFEPFFTMVKPILEPKTYNKVKFAYSDDQNTKKIMEDLFDFDQLETAFGGNDDTGFDINKYADRMKEDDKKIPAFWTRENSPSSVPNHVPSLDSTRLDSNTDGSDNEKLDSSPDLVVDTGIINPDHKSLVSEGERNTSAD* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1780 331 CDD SEC14 92 242 IPR001251 -
Pvu8g1780 331 SMART sec14_4 90 244 IPR001251 -
Pvu8g1780 331 MobiDBLite consensus disorder prediction 268 290 - -
Pvu8g1780 331 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Pvu8g1780 331 PANTHER GH16843P 1 303 - -
Pvu8g1780 331 Gene3D - 3 271 IPR036865 -
Pvu8g1780 331 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Pvu8g1780 331 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 303 - -
Pvu8g1780 331 MobiDBLite consensus disorder prediction 268 331 - -
Pvu8g1780 331 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Pvu8g1780 331 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Pvu8g1780 331 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Pvu8g1780 331 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1780 Pvu-Chr8 44845452 44850960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1780 - - gmx:100780151 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1780 8 44845452 44850960 Pvu8g1780 8 44845452 44850960 ECH
Pvu8g1780 8 44845452 44850960 Pvu9g0301 9 6457469 6459826 PCT