Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0297 ATGTTGTTAGGGAAGAGACCTCGTCCTCCAATGAAGAGAACTACCAGCATGTCAGAGATAACCTTCGATCTCAACACAACCTTGGATGATGCTCAAAACAACCCTGTCAAGGGAGGACTTGGGCCAGACCCGTGGTCGAAACACACACCCGTTGTTGGGTCGAACGGGTTAGATCAGAGCAGGGTTTGGGCCCTAGTTTCACCCAGAAACCATAGAAGGCATTCGGAAGATTCTGCACACACTCCTGAGTTCTTGCGCGTTTGCTTTCTCTGCAAACATCGTTTAGTTCCTGGTCGTGACATCTACATGTACAGAGGCGACAGTGCTTTCTGCAGTTCAGAATGCCGAGAAAAACAGATGAAGCAGGATGAACGAAAGAATAATAAGTGTGGTGTGGCATCAAAGAAGCAAGTTGCAGCTACGCCTTCTGGGTCTCAAGTTAGAAGTAGCAAAGGCGAAACCGTTGTTGCCTTGTAG 477 0.4822 MLLGKRPRPPMKRTTSMSEITFDLNTTLDDAQNNPVKGGLGPDPWSKHTPVVGSNGLDQSRVWALVSPRNHRRHSEDSAHTPEFLRVCFLCKHRLVPGRDIYMYRGDSAFCSSECREKQMKQDERKNNKCGVASKKQVAATPSGSQVRSSKGETVVAL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0297 158 Pfam zinc-finger of the FCS-type, C2-C2 76 126 IPR007650 -
Pvu9g0297 158 MobiDBLite consensus disorder prediction 122 158 - -
Pvu9g0297 158 MobiDBLite consensus disorder prediction 138 152 - -
Pvu9g0297 158 ProSiteProfiles Zinc finger FLZ-type profile. 83 127 IPR007650 -
Pvu9g0297 158 PANTHER FCS-LIKE ZINC FINGER 5 1 157 - -
Pvu9g0297 158 PANTHER FCS-LIKE ZINC FINGER 5 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0297 Pvu-Chr9 6413189 6414622 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0297 - - var:108331042 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0297 9 6413189 6414622 Pvu9g0297 9 6413189 6414622 ECH
Pvu8g1774 8 44669392 44670390 Pvu9g0297 9 6413189 6414622 PCT