Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1774 ATGTTGCTCGGTAAGAGACCTCGTCCTCCAATGAAGAGAACCACCAGCATGTCCGAAATAACGTTGGATCTGAACGCCGCCGCCTCCGATGCAGCCAACCAACGGAGATCAGGTGCTAGTGGCGGCGCGTTAACACCCAAAATCCTCAGAAGACATTCTTCGGATTTGGTAGACACACCTCACTTCCTGCGCGTGTGTGCCCTCTGCAAAGGCCGTCTCGCACCCGGTCGCGACATCTACATGTACAGGGGTGATAGTGCTTTCTGCAGCCTTGAGTGTCGTCAGCACCAGATGAACCAGGACGAGAGAAAAGAGAAGTTTGTGACGGCGTCGAAGAAGCAAGTCGTGGCTCCTCCACCGTCTGGTTCTCAAATCGCCGCCACCACCAAGGGTGAAACCACCGTGGTGGCGTTGTAG 417 0.554 MLLGKRPRPPMKRTTSMSEITLDLNAAASDAANQRRSGASGGALTPKILRRHSSDLVDTPHFLRVCALCKGRLAPGRDIYMYRGDSAFCSLECRQHQMNQDERKEKFVTASKKQVVAPPPSGSQIAATTKGETTVVAL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1774 138 ProSiteProfiles Zinc finger FLZ-type profile. 61 105 IPR007650 -
Pvu8g1774 138 PANTHER - 1 28 - -
Pvu8g1774 138 PANTHER - 43 137 - -
Pvu8g1774 138 Pfam zinc-finger of the FCS-type, C2-C2 54 104 IPR007650 -
Pvu8g1774 138 PANTHER FCS-LIKE ZINC FINGER 5 43 137 - -
Pvu8g1774 138 PANTHER FCS-LIKE ZINC FINGER 5 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1774 Pvu-Chr8 44669392 44670390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1774 - - gmx:100527853 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1774 8 44669392 44670390 Pvu8g1774 8 44669392 44670390 ECH
Pvu8g1774 8 44669392 44670390 Pvu9g0297 9 6413189 6414622 PCT