Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0281 ATGGGTGCATTTTTCAGTGTGGCCAGTACAAAATCTGGCAAGAGGGAATGGAATGGAGTCTCTCCGAATGAGACGTGTAAGAGACAGAGAATGTCTCCTACTGTTGATGAAGAGAGTCCTAGGCTCATTCCTAATCTCCCTGATGAGTTATCTCTTCAGATTATTGCTAGACTTCCTAGAATTTGTTACTTAAATGTAAGGATGGTATCAAAGAAGTGGAAGTCAACTACCATGAGTTTAGAACTGTATAAATTAAGGAAAGAACTTGGGACAACTGAAGAGTGGCTGTATCTATTGATTAAGGATGGAGAAAATAATCTTTTATGGCATGCTCTAGATCCTCGTTCTAAGATATGGCAGAGAGTGCCTAATATGCCCAATTTTGCCGATGAAGAAGAACCTAGAAAAGGTTCTTCTAGGCTTTGGATGTGGAACATGGTGGAGGGTATCAGAATTGCTGAAGTTATTAGAGGTTTTCTTGGACGGAAGGATGCATTTGATGAAATGCCCTATTGCGGTTGTGCAATTGGAGCTGTTGATGGGTGTCTCTATGTTCTTGGTGGATTTTCTAAGGCTTCAACTATGAGATGTGTGTGGCGATTTGATCCGATACAAAGTACATGGAGCAAGGTGAGTCCTATGTCCACGGGCCGGGCGTACAGTAAGACAGGCATCTTGAATAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCAAGCTGGATTGGTTCCTCTCCAATCTGCGGAAGTTTTTGATCCCTCTACAGATACATGGTCGCATGTACCCAGTATGCCATTCTCTAGAGCTCAAGTGCTTCCCAGTGCTTTTTTGGCTGACATGTTAAAGCCTATTGCCACAGGGTTGACCTCATACATGGGAAGGTTGTGTGTTCCACAGTCTCTGTATTCATGGCCCTTTTTTGTTGATGTTGGGGGAGAAATCTATGATCCTGACACTGACTCATGGATAGAAATGCCCGCTGGAATGGGTGAAGGCTGGCCTGCACGACAGGCAGGAACCAAATTGAGTGTAGTAGTGGACGGTGAATTATATGCTTTTGACCCTTCTAATTCTATGGATAGTGGAAGGATCAAGGTATATGACCAAGGTGAAGATGCTTGGAAAGTAGTTATTGGAAAAGTGCCCATATATGATTCTGCTGATTCAGAGTCTCCATATCTACTTGCTGGTTTCCATGGAAAGCTCCATGTTATTACAAAAGATGCCAACCATGATATTGCTGTTCTGCAGGCAGGCCTGCGGAATAATTTGGGATCCTCACCATCACTCTCAACTCTGTCACAAAGTACATTGCATGAATCTCCAGAATTGGCTTCTGAATCAGATGCAGCCGTTGTTTGGAGGGTAGTTGCCTGCAGGGATTTTGGGCGGGCTGAACTAGTCAGTTGCCAAGTTATTGACATATAG 1431 0.4361 MGAFFSVASTKSGKREWNGVSPNETCKRQRMSPTVDEESPRLIPNLPDELSLQIIARLPRICYLNVRMVSKKWKSTTMSLELYKLRKELGTTEEWLYLLIKDGENNLLWHALDPRSKIWQRVPNMPNFADEEEPRKGSSRLWMWNMVEGIRIAEVIRGFLGRKDAFDEMPYCGCAIGAVDGCLYVLGGFSKASTMRCVWRFDPIQSTWSKVSPMSTGRAYSKTGILNNKLYVVGGVSQGQAGLVPLQSAEVFDPSTDTWSHVPSMPFSRAQVLPSAFLADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPDTDSWIEMPAGMGEGWPARQAGTKLSVVVDGELYAFDPSNSMDSGRIKVYDQGEDAWKVVIGKVPIYDSADSESPYLLAGFHGKLHVITKDANHDIAVLQAGLRNNLGSSPSLSTLSQSTLHESPELASESDAAVVWRVVACRDFGRAELVSCQVIDI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0281 476 MobiDBLite consensus disorder prediction 11 29 - -
Pvu9g0281 476 SUPERFAMILY Kelch motif 99 406 IPR015915 GO:0005515
Pvu9g0281 476 Pfam F-box domain 44 83 IPR001810 GO:0005515
Pvu9g0281 476 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 3 476 - -
Pvu9g0281 476 SUPERFAMILY F-box domain 39 83 IPR036047 GO:0005515
Pvu9g0281 476 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 476 - -
Pvu9g0281 476 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Pvu9g0281 476 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Pvu9g0281 476 SMART kelc_smart 182 228 IPR006652 GO:0005515
Pvu9g0281 476 SMART kelc_smart 229 279 IPR006652 GO:0005515
Pvu9g0281 476 SMART fbox_2 46 86 IPR001810 GO:0005515
Pvu9g0281 476 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Pvu9g0281 476 Gene3D - 101 385 IPR015915 GO:0005515
Pvu9g0281 476 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0281 Pvu-Chr9 6112072 6114671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0281 36 264 Miscellaneous Gene Families AT4G33900 28.270 4.16e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0281 - - gmx:100806691 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0281 9 6112072 6114671 Pvu9g0281 9 6112072 6114671 ECH
Pvu8g1764 8 44385577 44388615 Pvu9g0281 9 6112072 6114671 PCT