Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1764 ATGGGTTCTTTGTTTAGCATGACTAATACCAAGACCAATCAAAGTAAATCTGAGGAAATATGTCCTAATGAGAGGTTTAAGAGGCAAAGAATGTCACCTGCCACAGTTGAAGAATGTCCAAGACTTATTCCTAATCTCCCTGATGAGTTATCCCTTCAGATTATGGCTAGACTTCCTAGAATTTGTTACTATCATATAAGGCTGGTGTCTAGGAGGTGGAAAGCAACTATCATGAATAATGAATTATATAAAGTAAGGAAAGAGATTGGAACAACTGAAGAGTGGCTATATCTGTTGGTTAGGGATGGGCAAAATAAACTCTTATGGCATGCTCTAGACCCTCGTTCTGGAATATGGCAGAGACTTCCTGTTATGCCCAGTGTTGTGGATGAAGAAAATTCCCAAAAGGGTTCTTCTAGGTTTTGGATGTGGAACATGGTAGAAGGTATCAGAATTGCTGAAATTATTAGAGGTCTTCTCAGACAGAAGGATGCATTAGATGACATGCCTTTTTGTGGTTGTTCCTTCGGAGCTGTTGATGGATGTCTTTATGTTCTAGGTGGATTCTCTAAAGCTTCAACTGTGAAATGTGTTTGGCGATTTGATCCGATACAAAATGTGTGGAAGAAGGTTACTTCTATGTCCACAGGTAGGGCATATTGCAAGACAAGCATCTTAAACAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCAAGCAGGATTGATTCCTCTTCGGTCTGCTGAAGTTTATGATCCATTTACGGATACATGGTCCGATGTACCTAGTATGCCATTCTCGCGCGCTGGAGTGCTGCCCACAGTTTTTCTGGCTGACATGTTAAGGCCTATTGCCACTGGGCTAACCTCATACAAGGGAAGGTTATATGTTCCTCAAAGTTTGTATTCATGGCCCTTTTTTGTTGATGTTGGGGGAGAAATATATGATCCAGAAACAAATTCATGGATAGAAATGCCAAATGGAATGGGTGAAGGATGGCCAATTAAGCAGGCAGGAACAAAATTGAGTGTTGTAGTGAATGATGAACTATATGCTTTTGATCCTTCAAATTCTATGGATAATGGAAAGATCAAGGTATATGATGAAGGAGAGGATGCATGGAAAGTTGTTATTGGAAAAGTCCCTGTGTATGACTTTAGCAATTCAGAGTCTCCATATCTATTAGCAGGTTTGCATGGAAAGCTTCATTTCATTGCAAAAAATTCGAAGCAAGATATTGCTGTTCTGCAGGCTGTTCCATGCAATAATTTGGATTCTTCACCATCAGCCTCAACATCTCTATCACCCAAATCCATGCAGGATGAATTTTTGATAGATTCGGCTGCCGAAACCGAAACAGATCCAGTTGTTTGGATAGAAGTGGCCAGTAGGAGTTTTGGGCTGTCTGAACTCATCAATTGCCAAGTTGTTGATATCTAA 1443 0.4033 MGSLFSMTNTKTNQSKSEEICPNERFKRQRMSPATVEECPRLIPNLPDELSLQIMARLPRICYYHIRLVSRRWKATIMNNELYKVRKEIGTTEEWLYLLVRDGQNKLLWHALDPRSGIWQRLPVMPSVVDEENSQKGSSRFWMWNMVEGIRIAEIIRGLLRQKDALDDMPFCGCSFGAVDGCLYVLGGFSKASTVKCVWRFDPIQNVWKKVTSMSTGRAYCKTSILNNKLYVVGGVSQGQAGLIPLRSAEVYDPFTDTWSDVPSMPFSRAGVLPTVFLADMLRPIATGLTSYKGRLYVPQSLYSWPFFVDVGGEIYDPETNSWIEMPNGMGEGWPIKQAGTKLSVVVNDELYAFDPSNSMDNGKIKVYDEGEDAWKVVIGKVPVYDFSNSESPYLLAGLHGKLHFIAKNSKQDIAVLQAVPCNNLDSSPSASTSLSPKSMQDEFLIDSAAETETDPVVWIEVASRSFGLSELINCQVVDI* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1764 480 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 3 480 - -
Pvu8g1764 480 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Pvu8g1764 480 SUPERFAMILY Kelch motif 101 385 IPR015915 GO:0005515
Pvu8g1764 480 SMART fbox_2 46 86 IPR001810 GO:0005515
Pvu8g1764 480 Pfam F-box-like 43 84 IPR001810 GO:0005515
Pvu8g1764 480 SUPERFAMILY F-box domain 42 86 IPR036047 GO:0005515
Pvu8g1764 480 MobiDBLite consensus disorder prediction 1 21 - -
Pvu8g1764 480 Gene3D - 78 383 IPR015915 GO:0005515
Pvu8g1764 480 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Pvu8g1764 480 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Pvu8g1764 480 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 480 - -
Pvu8g1764 480 SMART kelc_smart 229 279 IPR006652 GO:0005515
Pvu8g1764 480 SMART kelc_smart 182 228 IPR006652 GO:0005515
Pvu8g1764 480 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1764 Pvu-Chr8 44385577 44388615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1764 46 264 Miscellaneous Gene Families AT4G33900 23.077 3.59e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1764 - - var:108338547 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1764 8 44385577 44388615 Pvu8g1764 8 44385577 44388615 ECH
Pvu8g1764 8 44385577 44388615 Pvu9g0281 9 6112072 6114671 PCT