Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0278 ATGGAACATCTACAGTCAGAGGAGACGACTGGAGTGAATTCTCAAGCTGTTGAGAACTTGCGGGTGGGTGATTTGGTAACTGATCAGGAGAAACAGTCAAAGGAGGCTGAAGCTCAGAATATTGGTCATGATGGTCCCGAGTTTGATGATATATCAGATGCGGCAGATGTAAGGTCTAAGAGGAACGATGAGAGCAGGGATTTGCAATCTCGAACTCAACTCGAAAACTTAGAAACCAAATCTGAAACTGAAATTATTACTGATAGGCAAGAGGATTCTGGTGATAAGACGAGTGCTGGTGGAGATTTGGAGTCCAGAAACCAAGAAACAAATCTAGATGGTAATTCTGGACAGACTGACTTGGCTAATGAAGTGGATGATAGGGAATCAACGCAGGTGTTTGATAAGTCGGATGAAATTCCAAGCGAGGACCCCAATTTGGAGCCTGTATTTGATGGAACAGAGGTTCCAGGGATGGAGGCTAACCGCAGTATGTCTGGCCGTAGGTACGATGCAGATCAGGACTCCCCAGGAGTGGTTGAGAAGGCTGTGGCTCTTAAGAATTTTGTTAAGGAGAAGAGTGCGGTGGCTGTCTCCACCATGATGCGTCGCCTTTCTGGAAAAAGAGACGAAGGTGCTGTGGATAATGTTGACGATGAAGGTAAGGATGTATCAGATATTAGAAAAGTTGGTGAAAACAAAGTGGCGTCTGAGAAGGCAGCGGAGAAATTTGACTGGAATCCCTTAAATTACATCAAGAAGTCATCCGATGCTGGTGTGGAAAACAAAACTGAGCAGATAGACTCAATAGTCATGAAAGGAAGGATTATACTATACACGAAACTAGGGTGCCAAGAATCTAACGAGATTAGGCTGTTTTTGCGTTTGAAAAGGCTTAGATATGTCGAAATCAACATCGATGTGTTCCCTAGTAGAAAGAAGGAGCTGGAGAGGATTTCTGGATCTACTTCTGTACCTAAGGTTTTCTTCAATGAAATACTTATTGGAGGCTCGAGTGAGTTGAAGGTTCTAGATGAGTCTGGCAAGCTTGATGAGAAGGTTGACTTTCTTATTACTGAAGAACCATTATCTGAGGCCCCATCGCCACCTCTCTCTGGAGAGGATGATGTGCCCAATAGTGGCCTACCTGATGAAATGGCAATTGTTGTCCGCAAAATGAAAGAATCCATAGCTGTGAAGGACCGCTTACATAAAGTGCGCAGGTTCACTAACTGTTTTCTTGGCTCAGAAGCTATCGACTTCTTATCAGAAGATCAATATTTGGAAAGGCCAGAGGCTGTTGAGTTTGCACGAAAGCTTGCCGACAAACACTTCTTTCGACACGTTACTGATGAAAATCTATTTGAGGATGGAAACCATCTGTATCGGTTTTTGGATGATGACCCCATTGTGGTGTCACAATGTCACAACATTCCTAGAGGCATAAGTACCTTGAAGCCCAAGCCTTTAGCGGAAATTGCGTCAAGACTAAGGTTTCTGTCCCGTGCAATATTTGAAGCCTATGCTTATGAAGATGGACGTCGTGTTGATTATACAAGTATTCATGCGAGTGAAGAGTTCGCGAGGTATCTGAGAATCGTGGAAGAGCTCCAGAGAGTGGAAATATCGGATTCTTCTAGAGAAGAGAAGCTTGCGTTCTTTATTAATCTTTATAATATGATGGCAATCCATGCAATCTTAGTGTTGGGCCATCCAGATGGAGCTCTGGAAAGAAGGAAATTATTTGGAGAGTTCAAATATGTTATTGGCGGGTCCACGTACTCACTTTCAGCTATTCAAAATGGCATTTTGCGGGGAAACCAACGGCCACCATATAACCTTAAGAAGCCATTTGGGGCAAAAGATAAACGCTCGACGGTGGCACTTCCTTACCCTGAGCCTCTTATTCATTTTGCTTTGGTATATGGTACCCGATCTGGGCCTGCACTTCGCTGCTACTCTCCTGGAAAGATTGATGAAGAGTTATTGGACGCAGCCCGTAATTTTTTAAGAAATGGAGGCGTTGTAATTGATTCGAGTGCGAAGGCTGTAAATGCTAGTAAGATCCTCAAATGGTACAGTATAGATTTTGGCAAGAACGAGGTAGAGGTGATAAAGCATGTTTCAAACTACTTAGATCCAGCTGAGTCTGAAGTATTGTTGGACCTACTTGCTACTTCCGAGTTGAAGGTGACATATCAGCATTATGACTGGGGTTTGAACTGCTAG 2229 0.4352 MEHLQSEETTGVNSQAVENLRVGDLVTDQEKQSKEAEAQNIGHDGPEFDDISDAADVRSKRNDESRDLQSRTQLENLETKSETEIITDRQEDSGDKTSAGGDLESRNQETNLDGNSGQTDLANEVDDRESTQVFDKSDEIPSEDPNLEPVFDGTEVPGMEANRSMSGRRYDADQDSPGVVEKAVALKNFVKEKSAVAVSTMMRRLSGKRDEGAVDNVDDEGKDVSDIRKVGENKVASEKAAEKFDWNPLNYIKKSSDAGVENKTEQIDSIVMKGRIILYTKLGCQESNEIRLFLRLKRLRYVEINIDVFPSRKKELERISGSTSVPKVFFNEILIGGSSELKVLDESGKLDEKVDFLITEEPLSEAPSPPLSGEDDVPNSGLPDEMAIVVRKMKESIAVKDRLHKVRRFTNCFLGSEAIDFLSEDQYLERPEAVEFARKLADKHFFRHVTDENLFEDGNHLYRFLDDDPIVVSQCHNIPRGISTLKPKPLAEIASRLRFLSRAIFEAYAYEDGRRVDYTSIHASEEFARYLRIVEELQRVEISDSSREEKLAFFINLYNMMAIHAILVLGHPDGALERRKLFGEFKYVIGGSTYSLSAIQNGILRGNQRPPYNLKKPFGAKDKRSTVALPYPEPLIHFALVYGTRSGPALRCYSPGKIDEELLDAARNFLRNGGVVIDSSAKAVNASKILKWYSIDFGKNEVEVIKHVSNYLDPAESEVLLDLLATSELKVTYQHYDWGLNC* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0278 742 SUPERFAMILY Thioredoxin-like 263 354 IPR036249 -
Pvu9g0278 742 Pfam Protein of unknown function, DUF547 544 670 IPR006869 -
Pvu9g0278 742 MobiDBLite consensus disorder prediction 24 99 - -
Pvu9g0278 742 MobiDBLite consensus disorder prediction 100 121 - -
Pvu9g0278 742 CDD DEP 385 463 - -
Pvu9g0278 742 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 741 - -
Pvu9g0278 742 Gene3D Glutaredoxin 261 356 - -
Pvu9g0278 742 Pfam Glutaredoxin 276 332 IPR002109 -
Pvu9g0278 742 ProSiteProfiles Glutaredoxin domain profile. 264 361 - -
Pvu9g0278 742 MobiDBLite consensus disorder prediction 1 174 - -
Pvu9g0278 742 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 741 - -
Pvu9g0278 742 SUPERFAMILY "Winged helix" DNA-binding domain 388 470 IPR036390 -
Pvu9g0278 742 SMART DEP_3 393 466 IPR000591 GO:0035556
Pvu9g0278 742 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 397 464 IPR000591 GO:0035556
Pvu9g0278 742 MobiDBLite consensus disorder prediction 122 143 - -
Pvu9g0278 742 ProSiteProfiles DEP domain profile. 393 466 IPR000591 GO:0035556
Pvu9g0278 742 Gene3D - 385 508 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0278 Pvu-Chr9 6077260 6081426 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0278 - - ccaj:109797380 1251.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0278 9 6077260 6081426 Pvu9g0278 9 6077260 6081426 ECH
Pvu8g1756 8 44111339 44123657 Pvu9g0278 9 6077260 6081426 PCT