Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1756 ATGGAAAGGAAAGAGTTAGAGGAGACAGATGAGCCAAGTCCTCGGGCCGTTGGAAAGATAGAAGGGGATTCGAGTGAAGAAGATAGGGAAAAACACTCAGTGGGGCCAGAAACTCAAAATGTAGACTATGATACCTCTGAGTTCGGGAATGATCAAGGAGATGTACCGTACAATATATGTTCTCAAGATGTTGAAAAGCTGGAAGGAGATGGTTTTACCGTTCAGAGTGAAGAATGTGAGAAGGGATCAAAGGAGGGGAAAATTCAGAATATGGGTCATGATTCCCCCGAGTTTGATGATGAGCAGGATAGTATGCCAGACAGGGTGGATGAGGTGATAGATGTAGAGTTGAATACTCATGAGGATAGAAAAGACAATGTAGCAGGAGAATCTCAGTTGGCTCAGAGATTGGGGGATAACTGCGATTTACTGTGTGGATCTCCAGAGAAAAACTTGGAGACCTGTACCGTTCCAGATGACTTGTTTCAAAAGGAGCATGATAGTGATTCCATGGAATCTGAAATTGAACTTAGCATTATTGCACAAGAGTGTTCTGGTGTTAAGGGAGACAGTGGAGATTTTGAGCGTAAAAGTCAAGAAGTAAGTCTAGATAATAATTTTGTGCAGCAGGGTTTGTTCATAGAGAAGGATGACAGCAGAAGCATGGAATCGGCGCAAACGAATCAAAAAACAGAGAACTCTTCACAGGGCAATAATTTGGAGCCTGAAGTTGGTGGAGCTGAGGTTCCTGGAACTGAAGCTGGCTGCAGCACATCTATGGTTACTTTCAACACCAATCCGGAGGTTCCAGGTGTGGTTCAGAAGACAATATCTCTTAGACACTTCGTTATGGAGAAAGGTATAATAGCAGTCTCCATGGTGCTTCGCCACCTTTCTGGAAAAAGAGACGAATGTACTGTGGGTAAATCTGATGACATGGGTAAGGACCGTTCAGATTTATCAAGAGACAGTGATACGAAAAATGTTATTGAGAAGACAGTTGAGAAAACAACTTGGAACCCCTTAAATTATATTAATAAAACGTCATCTGATGTTGATGATGAAAATAGAACTGTCCCAAGGGAGGAACCCATAAATGAAGGTCCACCACTACCCATAGTCATGAAAGGAAGGATTATAGTGTACACGAGACTAGGGTGCCAAGAATGTAGAGAGGTTAGGAAATTTTTGTATATGAAAAGGCTTAGATATGTTGAAATCAACATTGATGTCTATCCCAGTAGAAAGATGGAGCTGGAGAAAAATTCAGGATCTACTTCTATTCCCAAGGTTTTTTTCAATGGAATACTTATTGGAGGCTTGAGTACACTAAAGTCCTTAAATGAGTCTGGCAAACTTAATGAGAAGATTGACTACCTTATTAATGAAATACCATCATTTGAATGCCCAGTTCCGCCACTTTCTGGAGAGGATGATGTGTCCAGTAGAGGGGCGCTAGATGAAATGGCTCTAATTGTCCGCAAAATGAAAGAATGCATTGTTGTGAAGGACCGATTTTACAAAATGCGGAGGTTTACTAACTGCTTCATTGCTTCTGAAGCCGTGGACTTCTTATCAGAAGATCAATATTTGGAAAGGAAGGAGGCTGTTGAGTTTGCACGAAAACTTGCCAGCAAACTCTTCTTTCAGCATGTTTTTGATGAGAATCTATTTGAGGATGGTAATCACCTGTATCGATTTTTGGATGACGATCCAACTGTGGCATCTTTTTGTTACAACATTCCGAGGGGGATAATTACTGTGAAACCTAAGCCTATGACAGAAGTTGCATCGAGGCTCAGGCTTTTGTCCTATGCAATGTTTGAAGCCTATGCCTCTGAAGATGGACGTCATGTTGACTACAGAAGTATGCACGGAAGTGAGGAGTTTGCAAGATATCTAAGAATAATAGAAGAGCTCCAAAGAGGGGAAGTATGGCATTTATCTAGAGAAGAGAAGCTTGCTTTTTTTATTAATCTATATAATATGATGACCATCCATGCAATCTTAGTATGGGGTCACCCTTCTGGAACTGTAGAAAGAAGGAAATTATTTGGAGACTTCAAATATGTTATTGGTGGATTCACCTACTCACTTTCAGCCATTCAAAGTGGCATTTTGAGGGCGAACCAACGACAACCATATACCTTTACGAAGCCATTCAGTGCAAAAGATAAACGTTTAAGGGTGACCCTCCCTTTCCCGGAGTCCCTTGTTCATTTTGCTTTGGTATGTGGTACTCGATCTGGACCCTCACTTCGGTGCTATTCTCCCGGGGACATTGACAAAGAATTAGCGGATGCAGCCCGTAGTTTCTTAAGAAATGGAGGCCTTTCAATAGATTTTACTGCAAAGATTGCATATGCCAGTAAGATCCTTAAGTGGTTTAGTGTAGATTTTGGTAAGAATGAGGTAGAGGTCCTGAAGCATGTGTCGAGCTACTTAGATCCTGCCGAATCAGAATTATTGTTGGACCTACTTGCCACTTCTGAGTTGAAGGTGATATACCAGCCTTATGATTGGGGTTTGAACTGCTAG 2538 0.4149 MERKELEETDEPSPRAVGKIEGDSSEEDREKHSVGPETQNVDYDTSEFGNDQGDVPYNICSQDVEKLEGDGFTVQSEECEKGSKEGKIQNMGHDSPEFDDEQDSMPDRVDEVIDVELNTHEDRKDNVAGESQLAQRLGDNCDLLCGSPEKNLETCTVPDDLFQKEHDSDSMESEIELSIIAQECSGVKGDSGDFERKSQEVSLDNNFVQQGLFIEKDDSRSMESAQTNQKTENSSQGNNLEPEVGGAEVPGTEAGCSTSMVTFNTNPEVPGVVQKTISLRHFVMEKGIIAVSMVLRHLSGKRDECTVGKSDDMGKDRSDLSRDSDTKNVIEKTVEKTTWNPLNYINKTSSDVDDENRTVPREEPINEGPPLPIVMKGRIIVYTRLGCQECREVRKFLYMKRLRYVEINIDVYPSRKMELEKNSGSTSIPKVFFNGILIGGLSTLKSLNESGKLNEKIDYLINEIPSFECPVPPLSGEDDVSSRGALDEMALIVRKMKECIVVKDRFYKMRRFTNCFIASEAVDFLSEDQYLERKEAVEFARKLASKLFFQHVFDENLFEDGNHLYRFLDDDPTVASFCYNIPRGIITVKPKPMTEVASRLRLLSYAMFEAYASEDGRHVDYRSMHGSEEFARYLRIIEELQRGEVWHLSREEKLAFFINLYNMMTIHAILVWGHPSGTVERRKLFGDFKYVIGGFTYSLSAIQSGILRANQRQPYTFTKPFSAKDKRLRVTLPFPESLVHFALVCGTRSGPSLRCYSPGDIDKELADAARSFLRNGGLSIDFTAKIAYASKILKWFSVDFGKNEVEVLKHVSSYLDPAESELLLDLLATSELKVIYQPYDWGLNC* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1756 845 ProSiteProfiles Glutaredoxin domain profile. 367 464 - -
Pvu8g1756 845 MobiDBLite consensus disorder prediction 214 253 - -
Pvu8g1756 845 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 844 - -
Pvu8g1756 845 MobiDBLite consensus disorder prediction 1 106 - -
Pvu8g1756 845 MobiDBLite consensus disorder prediction 1 37 - -
Pvu8g1756 845 Gene3D - 482 575 IPR036388 -
Pvu8g1756 845 SUPERFAMILY Thioredoxin-like 375 458 IPR036249 -
Pvu8g1756 845 Pfam Protein of unknown function, DUF547 647 773 IPR006869 -
Pvu8g1756 845 ProSiteProfiles DEP domain profile. 496 569 IPR000591 GO:0035556
Pvu8g1756 845 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 844 - -
Pvu8g1756 845 MobiDBLite consensus disorder prediction 345 368 - -
Pvu8g1756 845 MobiDBLite consensus disorder prediction 224 241 - -
Pvu8g1756 845 Pfam Glutaredoxin 379 436 IPR002109 -
Pvu8g1756 845 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 501 567 IPR000591 GO:0035556
Pvu8g1756 845 SMART DEP_3 495 569 IPR000591 GO:0035556
Pvu8g1756 845 CDD DEP 492 566 - -
Pvu8g1756 845 MobiDBLite consensus disorder prediction 70 99 - -
Pvu8g1756 845 Gene3D Glutaredoxin 375 459 - -
Pvu8g1756 845 SUPERFAMILY "Winged helix" DNA-binding domain 489 577 IPR036390 -
Pvu8g1756 845 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1756 Pvu-Chr8 44111339 44123657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1756 - - ccaj:109814814 1327
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1756 8 44111339 44123657 Pvu8g1756 8 44111339 44123657 ECH
Pvu8g1756 8 44111339 44123657 Pvu9g0278 9 6077260 6081426 PCT