Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0163 ATGGCTTTCAGAAAATCAGGTAAACTCCCACAAGCAGCACTCATCAAGCAAATCCTCAAGAGGTGTTCCAGCTTAGGGAGAAAAGACGATCATGGCCTACGCTTGGACGTGCCCAAGGGTCACTTTGTTGTGTACGTCGGAGAAAACAGAAGCAGATATATAGTTCCAATTTCCTTCCTAAGTCGCCCTGAGTTCCAAACGCTCCTCCACCAGGCAGAAGAAGAGTTCGGCTTCGATCACGAAAAGGGTCTCACCATTCCATGCGAAGAAGACGTTTTTGAGTCTCTCACCTCCATGCTCCGATGA 306 0.4837 MAFRKSGKLPQAALIKQILKRCSSLGRKDDHGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHEKGLTIPCEEDVFESLTSMLR* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0163 101 Pfam Auxin responsive protein 28 100 IPR003676 GO:0009733
Pvu9g0163 101 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 101 IPR003676 GO:0009733
Pvu9g0163 101 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0163 Pvu-Chr9 2570437 2571374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0163 36 96 Calmodulin-binding Proteins AT3G43120 55.738 2.75e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0163 K14488 - gmx:100778552 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0163 9 2570437 2571374 Pvu2g1131 2 22331727 22332609 ECH
Pvu9g0163 9 2570437 2571374 Pvu9g0163 9 2570437 2571374 ECH