Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1131 ATGGCCATAAGAAAATCCAATAAACTACCACAAGCTATTGTTCTCAAGCAAATAGTCAAGAGATGCTCAAGTTTTGGTAAGAAGCAGACCTACAATGAAGAGGGTCTTCCTGATGATGTGCCAAAAGGCCATTTTGCGGTCTATGTTGGGGAGAACAGGAGCAGATACATTATCCCAATCTCATGGCTGGCTTATCCCCAGTTTCAAAGTCTGCTCCAAAGAGCTGAGGAAGAGTTTGGTTTCAACCATGACATGGGACTTACCATACCCTGTGATGAAGTTGTATTTGAGTCCTTAACCTCCATGATGAGATAA 315 0.4254 MAIRKSNKLPQAIVLKQIVKRCSSFGKKQTYNEEGLPDDVPKGHFAVYVGENRSRYIIPISWLAYPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFESLTSMMR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1131 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Pvu2g1131 104 Coils Coil 104 104 - -
Pvu2g1131 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
Pvu2g1131 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1131 Pvu-Chr2 22331727 22332609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1131 5 103 Calmodulin-binding Proteins AT4G34750 39.394 1.33e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1131 K14488 - gmx:100798840 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0163 9 2570437 2571374 Pvu2g1131 2 22331727 22332609 ECH
Pvu11g0390 11 3284652 3285401 Pvu2g1131 2 22331727 22332609 ECH
Pvu2g1131 2 22331727 22332609 Pvu2g1131 2 22331727 22332609 ECH
Pvu9g0021 9 412706 413651 Pvu2g1131 2 22331727 22332609 ECH
Pvu2g1131 2 22331727 22332609 Pvu3g2705 3 49033068 49033742 PCT