Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2997 ATGGCAGATCACAGCGAACAGTCGAATTCCGACACGGCGGCGCTTCCGGAGGACCGTCCCATTCGGGTGTACGCCGACGGCATCTACGATCTCTTCCACTTTGGCCACGCTCGCTCCCTCGAGCAAGCCAAGAAATCGTTTCCGAATACGTATTTACTGGTTGGGTGCTGCAACGATGAAGTCACCCACAAATACAAAGGCAAAACTGTTATGACAGAGGCTGAACGATATGAATCCCTTCGCCACTGCAAATGGGTGGATGAAGTTATTCCTGATGCCCCTTGGGTTATTAACCAAGAGTTTCTTGACAAGCACAACATTGCCTATGTGGCTCATGACTCTCTTCCTTATGCTGATGCCAGTGGTGCTGCCAATGATGTTTATGAATTTGTTAAATCTGTTGGGAGGTTTAAGGAAACAAAACGGACTGAAGGAATATCCACGTCAGATGTTATAATGAGGATTGTCAAAGATTATAATCAATATGTGTTGCGGAACTTGGATCGTGGCTACTCGAGAAATGAGCTTGGCGTGAGCTATGTGAAGGAAAAGCGACTGAGGGTGAATAGAAGGTTGAAAACATTACAAGAGAAAGTGAAAGAACATCAAGAAAAAGTTGGTGAAAAGATCCAAATTGTTGCAAAGACTGCTGGTATGCATAGGAATGAGTGGGTGGAAAATGCTGATCGTTGGGTTGCTGGATTTCTGGAAATGTTTGAAGAAGGTTGCCACAAGATGGGAACAGCAATTAGGGATCGTATTCAAGAGAGGTTAAGAGGTCAGCAGTCAGGTGATGGCACACTTCTTCTAGAAAACGGCAAGGACAATAACGATGATGACGAAGAGGAGTATTATTATGATGAGGAGGATGACAGTGATGAAGAATTTTTTGAAGAATATTATGATGATGATGAGCTTAATCCTCAAAATAATGGAAAAGATGAGAACCAAAAGTAG 957 0.4347 MADHSEQSNSDTAALPEDRPIRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEVTHKYKGKTVMTEAERYESLRHCKWVDEVIPDAPWVINQEFLDKHNIAYVAHDSLPYADASGAANDVYEFVKSVGRFKETKRTEGISTSDVIMRIVKDYNQYVLRNLDRGYSRNELGVSYVKEKRLRVNRRLKTLQEKVKEHQEKVGEKIQIVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTAIRDRIQERLRGQQSGDGTLLLENGKDNNDDDEEEYYYDEEDDSDEEFFEEYYDDDELNPQNNGKDENQK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2997 318 Coils Coil 185 212 - -
Pvu8g2997 318 MobiDBLite consensus disorder prediction 261 293 - -
Pvu8g2997 318 SUPERFAMILY Nucleotidylyl transferase 22 153 - -
Pvu8g2997 318 Gene3D HUPs 2 241 IPR014729 -
Pvu8g2997 318 PANTHER CYTIDYLYLTRANSFERASE 5 297 IPR045049 GO:0004105|GO:0006657
Pvu8g2997 318 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 22 89 IPR004821 GO:0003824|GO:0009058
Pvu8g2997 318 Pfam Cytidylyltransferase-like 24 153 IPR004821 GO:0003824|GO:0009058
Pvu8g2997 318 CDD CCT 19 170 IPR041723 -
Pvu8g2997 318 MobiDBLite consensus disorder prediction 275 293 - -
Pvu8g2997 318 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 5 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2997 Pvu-Chr8 59354912 59358570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2997 47 304 Acyl Lipid Metabolism Gene Families AT2G32260 75.676 3.37e-140 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2997 K00968 - gmx:100803699 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0029 6 899273 906057 Pvu8g2997 8 59354912 59358570 PCT