Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0029 ATGGCGTTGGTCACTTCAACTCCTCCGCAAGATCGTCCTGTTCGTGTCTACGCTGATGGCATTTACGATCTCTTTCACTTTGGTCATGCTCGCTCCCTTGAACAAGCCAAAAAATCATTCCCAAACGCATACCTTCTTGTTGGATGTTGCAGTGATGCAGTGACCCACAAGTACAAAGGCAAAACAGTTATGACAGAAGATGAACGTTATGAGTCCCTTCGTCATTGCAAATGGGTGGATGAAGTCATTCCAGGTGCACCTTGGGTTATTAATCAAGAGTTTCTTGACCAGCACAGAATAGACTATGTTGCTCATGACTCTCTACCATACGCTGATACTAGTGGTGTTGCAAATGATGTTTATGAATTTGTTAAGGCCGTTGGGAAATTCAAGGAAACCCAACGAACTGATGGAATTTCTACATCAGATGTGATAATGAGAATTGTTAAAGATTACAATCAATATGTTCTAAGAAATTTGGATCGTGGGTACTCAAGAAAAGAGCTTGGTGTGAGCTATGTGAAGGAAAAACGACTAAGGGTGAATAGGAGGCTAAAAACTTTTCAAGAGAAAGTAAAAGAACATCAAGAGAAGATCCAAACTGTTGCAAAGAATGCTGGTATGCATCGAAATGAGTGGGTGGAAAATGCTGATCGTTTTGTTGTTGGATTTCTAGAAATGTTGGAAGAAGGTTGTCACAAAATGGGGACTGCAATTAGAGATCAAATTCAAAAGAGGTTAATGGGTGAGCAACCAAGCAATGATTCATTTCTTCTTCAAAATGGTGAGGATGATGGGGATGAAGAGTACTATTATTATGAGGGGGAGATTGATACTGATGAAGAATGTTTTGAAGAATATTTTGATGATGATGAGCTTAATCCCTTGAATAATTGGAAAGACCAAATAAAAAAGTAG 918 0.3922 MALVTSTPPQDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNAYLLVGCCSDAVTHKYKGKTVMTEDERYESLRHCKWVDEVIPGAPWVINQEFLDQHRIDYVAHDSLPYADTSGVANDVYEFVKAVGKFKETQRTDGISTSDVIMRIVKDYNQYVLRNLDRGYSRKELGVSYVKEKRLRVNRRLKTFQEKVKEHQEKIQTVAKNAGMHRNEWVENADRFVVGFLEMLEEGCHKMGTAIRDQIQKRLMGEQPSNDSFLLQNGEDDGDEEYYYYEGEIDTDEECFEEYFDDDELNPLNNWKDQIKK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0029 305 SUPERFAMILY Nucleotidylyl transferase 15 146 - -
Pvu6g0029 305 CDD CCT 12 163 IPR041723 -
Pvu6g0029 305 Gene3D HUPs 1 230 IPR014729 -
Pvu6g0029 305 PANTHER PHOSPHORYLCHOLINE CYTIDYLYLTRANSFERASE-RELATED 7 283 - -
Pvu6g0029 305 Pfam Cytidylyltransferase-like 17 146 IPR004821 GO:0003824|GO:0009058
Pvu6g0029 305 PANTHER CYTIDYLYLTRANSFERASE 7 283 IPR045049 GO:0004105|GO:0006657
Pvu6g0029 305 Coils Coil 178 205 - -
Pvu6g0029 305 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 15 82 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0029 Pvu-Chr6 899273 906057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0029 40 291 Acyl Lipid Metabolism Gene Families AT2G32260 69.960 3.63e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0029 K00968 - gmx:100790615 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0029 6 899273 906057 Pvu6g0029 6 899273 906057 ECH
Pvu6g0029 6 899273 906057 Pvu8g2997 8 59354912 59358570 PCT